Factsheet for Zm00001d021332_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
endoplasmic reticulum 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36207	Sorghum	mitochondrion	96.57	96.57
Os07t0476500-01	Rice	mitochondrion	80.69	80.0
TraesCS2D01G237600.1	Wheat	mitochondrion	76.39	76.39
TraesCS2B01G255000.1	Wheat	mitochondrion	76.39	76.39
GSMUA_Achr10P...	Banana	endoplasmic reticulum	60.09	59.83
GSMUA_Achr5P15930_001	Banana	mitochondrion	59.23	58.97
CDY24675	Canola	endoplasmic reticulum, mitochondrion, plastid	58.8	58.55
CDY05284	Canola	endoplasmic reticulum, mitochondrion, plastid	58.37	58.12
HORVU2Hr1G054470.1	Barley	plastid	61.37	56.08
KRH34786	Soybean	endoplasmic reticulum	55.79	56.03
Bra029595.1-P	Field mustard	mitochondrion, plastid	56.65	55.93
AT3G66654.3	Thale cress	plastid	55.79	55.08
KRH49483	Soybean	mitochondrion	52.79	54.67
KRG89165	Soybean	endoplasmic reticulum	52.79	53.48
PGSC0003DMT400072698	Potato	mitochondrion, plastid	51.5	52.17
Solyc09g008410.2.1	Tomato	plastid	52.79	52.12
PGSC0003DMT400009946	Potato	mitochondrion	52.36	51.69
Solyc10g083930.1.1	Tomato	nucleus	50.64	51.3
VIT_05s0077g01040.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	60.09	49.47
KRG91995	Soybean	endoplasmic reticulum, mitochondrion, plastid	55.79	44.52
Zm00001d036035_P001	Maize	cytosol	20.6	30.0
Zm00001d031937_P001	Maize	cytosol	17.17	22.99
Zm00001d049958_P002	Maize	cytosol	27.04	9.39
Zm00001d036620_P001	Maize	nucleus	17.17	8.95
Zm00001d028109_P006	Maize	cytosol	21.89	7.67
Zm00001d044297_P002	Maize	nucleus	16.31	6.93

Protein Annotations

EntrezGene:100280015	MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:B8A1B4	EMBL:BT055356	EMBL:BT061401
InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005794	GO:GO:0005802	GO:GO:0005886	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130
InterPro:IPR029000	ProteinID:ONM56861.1	ProteinID:ONM56862.1	ProteinID:ONM56864.1	PFAM:PF00160	PIRSF:PIRSF001467
PRINTS:PR00153	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF200	SUPFAM:SSF50891	TMHMM:TMhelix
UniParc:UPI00019175D3	EnsemblPlantsGene:Zm00001d021332	EnsemblPlants:Zm00001d021332_P002	EnsemblPlants:Zm00001d021332_T002	:	:

Description

Peptidyl-prolyl cis-trans isomerase CYP21-4

Coordinates

chr7:-:149060166..149064823

Molecular Weight (calculated)

26381.9 Da

IEP (calculated)

7.790

GRAVY (calculated)

-0.263

Length

233 amino acids

Sequence
(BLAST)

001: MARIKPKQLL IQSKTKKAPS RISYSTIITW NLIVILVVLS LYATYSHWHQ RSAQDFEMEL HEAELAVRPE DPKMISRPRY AVMNTAKGPI TIEIYKDASA
101: DVVDRFINLC KSNHFKGMPF RHIIKNFVIQ GGDFDFDGAS QEWITKAKAS GKNDLSPKHE AFMIGTAKNP NTKGFDLFIT TAPIPDLNDK LVVFGRVIKG
201: EDIVQEIEEV DTDEHYQPKA AIGIIDIVLK QEP

Best Arabidopsis Sequence Match ( AT3G66654.4 )
(BLAST)

001: MAKIKPQALL NQSKKKKGPS RISISTIIVC NLVVAVVILS LVTTYRHWSQ RSRNTIEHET RSQRFEDTNT ASGQKTYDLP GFADINTSKG LITVELFKEG
101: SPEVVDKFLD LCQKDHFKGM PFQRVIKNYL VQAGHSPSSI PVEEWTAKGK LRGRLHIGPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NDQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSPIGITGV VLKLET

Arabidopsis Description

CYP21-4Peptidyl-prolyl cis-trans isomerase CYP21-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.