CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
endoplasmic reticulum 1
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89165	Soybean	endoplasmic reticulum	93.78	91.74
KRH34786	Soybean	endoplasmic reticulum	80.89	78.45
KRG91995	Soybean	endoplasmic reticulum, mitochondrion, plastid	80.0	61.64
Solyc09g008410.2.1	Tomato	plastid	63.56	60.59
PGSC0003DMT400009946	Potato	mitochondrion	61.78	58.9
Solyc10g083930.1.1	Tomato	nucleus	58.67	57.39
PGSC0003DMT400072698	Potato	mitochondrion, plastid	58.67	57.39
CDY05284	Canola	endoplasmic reticulum, mitochondrion, plastid	59.11	56.84
CDY24675	Canola	endoplasmic reticulum, mitochondrion, plastid	59.11	56.84
AT3G66654.3	Thale cress	plastid	59.56	56.78
GSMUA_Achr5P15930_001	Banana	mitochondrion	57.33	55.13
Bra029595.1-P	Field mustard	mitochondrion, plastid	57.33	54.66
GSMUA_Achr10P...	Banana	endoplasmic reticulum	56.0	53.85
VIT_05s0077g01040.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	67.11	53.36
Zm00001d021332_P002	Maize	mitochondrion	54.67	52.79
KXG36207	Sorghum	mitochondrion	54.67	52.79
Os07t0476500-01	Rice	mitochondrion	55.11	52.77
TraesCS2B01G255000.1	Wheat	mitochondrion	52.89	51.07
TraesCS2D01G237600.1	Wheat	mitochondrion	51.56	49.79
HORVU2Hr1G054470.1	Barley	plastid	42.67	37.65
KRH67956	Soybean	endoplasmic reticulum, nucleus	19.56	26.83
KRH76297	Soybean	cytosol	18.67	25.45
KRG96215	Soybean	nucleus	19.56	19.91
KRH26593	Soybean	nucleus	30.67	11.2
KRH22711	Soybean	nucleus	30.22	11.04
KRH28354	Soybean	nucleus	23.11	8.71
KRH77127	Soybean	nucleus	22.22	8.38
KRH05304	Soybean	nucleus	16.89	7.71
KRG93223	Soybean	nucleus	16.0	5.62
KRH13056	Soybean	nucleus	15.56	5.53

Protein Annotations

EntrezGene:100797505	MapMan:18.12.1	Gene3D:2.40.100.10	EMBL:ACUP02004366	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase
InterPro:Cyclophilin-type_PPIase_dom	EnsemblPlantsGene:GLYMA_07G157800	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	UniProt:K7L1Z9
ProteinID:KRH49482.1	EnsemblPlants:KRH49483	ProteinID:KRH49483	ProteinID:KRH49483.1	PFAM:PF00160	PIRSF:PIRSF001467
PRINTS:PR00153	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF200	SUPFAM:SSF50891	TMHMM:TMhelix
UniParc:UPI000233907B	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:19487845..19493434

Molecular Weight (calculated)

25691.3 Da

IEP (calculated)

8.395

GRAVY (calculated)

-0.149

Length

225 amino acids

Sequence
(BLAST)

001: MGMIKPQALL QQSKRKKGPS RISATTIIFY TLTLVMLVFI LFVTYRHWSN RTRLQQERYI SVSEDENTSV ESKKSDLPGY AVVITSKGSI IVELYKESAP
101: EVVDEFIDLC QKGHFKGMLF HQVIKHYVIQ GPGATEDWNL LGKKYASMRH EAFMLGTSKG KYFNKVFDLF ITTAPIPDLN EKLIVFGRVI KGQDIVQEIE
201: EVDTDEHYQP KVSIGILDVA LKQLE

Best Arabidopsis Sequence Match ( AT3G66654.4 )
(BLAST)

001: MAKIKPQALL NQSKKKKGPS RISISTIIVC NLVVAVVILS LVTTYRHWSQ RSRNTIEHET RSQRFEDTNT ASGQKTYDLP GFADINTSKG LITVELFKEG
101: SPEVVDKFLD LCQKDHFKGM PFQRVIKNYL VQAGHSPSSI PVEEWTAKGK LRGRLHIGPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NDQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSPIGITGV VLKLET

Arabidopsis Description

CYP21-4Peptidyl-prolyl cis-trans isomerase CYP21-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.