Factsheet for GSMUA_Achr10P11190_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
mitochondrion 3
endoplasmic reticulum 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P15930_001	Banana	mitochondrion	80.34	80.34
Os07t0476500-01	Rice	mitochondrion	61.54	61.28
Zm00001d021332_P002	Maize	mitochondrion	59.83	60.09
KXG36207	Sorghum	mitochondrion	59.4	59.66
CDY05284	Canola	endoplasmic reticulum, mitochondrion, plastid	58.97	58.97
CDY24675	Canola	endoplasmic reticulum, mitochondrion, plastid	58.97	58.97
TraesCS2B01G255000.1	Wheat	mitochondrion	58.55	58.8
TraesCS2D01G237600.1	Wheat	mitochondrion	58.12	58.37
KRH34786	Soybean	endoplasmic reticulum	57.69	58.19
PGSC0003DMT400009946	Potato	mitochondrion	58.55	58.05
Solyc09g008410.2.1	Tomato	plastid	58.12	57.63
AT3G66654.3	Thale cress	plastid	57.69	57.2
Solyc10g083930.1.1	Tomato	nucleus	55.98	56.96
VIT_05s0077g01040.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	68.38	56.54
Bra029595.1-P	Field mustard	mitochondrion, plastid	56.84	56.36
KRH49483	Soybean	mitochondrion	53.85	56.0
KRG89165	Soybean	endoplasmic reticulum	54.27	55.22
PGSC0003DMT400072698	Potato	mitochondrion, plastid	54.27	55.22
KRG91995	Soybean	endoplasmic reticulum, mitochondrion, plastid	56.84	45.55
HORVU2Hr1G054470.1	Barley	plastid	47.44	43.53
GSMUA_Achr8P32900_001	Banana	cytosol	18.38	26.22
GSMUA_Achr1P17040_001	Banana	cytosol	26.5	9.9
GSMUA_Achr1P22460_001	Banana	cytosol	20.51	8.07
GSMUA_Achr8P05680_001	Banana	endoplasmic reticulum	17.09	7.08
GSMUA_Achr10P...	Banana	cytosol	15.38	6.5

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr10G11190_001	EnsemblPlants:GSMUA_Achr10P11190_001	EnsemblPlants:GSMUA_Achr10T11190_001	InterPro:IPR002130	InterPro:IPR029000	UniProt:M0RH95
PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF200
SUPFAM:SSF50891	TMHMM:TMhelix	UniParc:UPI000295AAEB	:	:	:

Description

Putative Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr10G11190_001]

Coordinates

chr10:+:20769482..20776004

Molecular Weight (calculated)

26043.6 Da

IEP (calculated)

9.795

GRAVY (calculated)

-0.231

Length

234 amino acids

Sequence
(BLAST)

001: MAKIKPQALL LQSKKKKGPT RINPSTVITC NIIVILIVLS LYATYRNWFN RSSNQLGKGL ENFEHSVTSG QSTGTHLPSY AIFNTAKGSI TIELYKDASR
101: DVVNKFVNLC QKGYFKGMLF NHVIKNFVIQ GGHSQKLEGA GDWILKGKAH SQLATSPKHE AFMLGTLKPN KDSKEFELFI TTAPIPDLSD KLIIFGRVIK
201: GEDVVQEIEE VDTDEHYRPK SPVGIVDIAL KQEA

Best Arabidopsis Sequence Match ( AT3G66654.4 )
(BLAST)

001: MAKIKPQALL NQSKKKKGPS RISISTIIVC NLVVAVVILS LVTTYRHWSQ RSRNTIEHET RSQRFEDTNT ASGQKTYDLP GFADINTSKG LITVELFKEG
101: SPEVVDKFLD LCQKDHFKGM PFQRVIKNYL VQAGHSPSSI PVEEWTAKGK LRGRLHIGPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NDQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSPIGITGV VLKLET

Arabidopsis Description

CYP21-4Peptidyl-prolyl cis-trans isomerase CYP21-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.