Factsheet for GSMUA_Achr8P05680_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
endoplasmic reticulum 5
extracellular 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0582400-01	Rice	extracellular	60.53	68.54
TraesCS3A01G209000.1	Wheat	nucleus	59.47	67.88
VIT_04s0008g01370.t01	Wine grape	cytosol	59.47	67.47
TraesCS3B01G239300.1	Wheat	nucleus	59.12	66.8
TraesCS3D01G211900.1	Wheat	nucleus	58.94	66.73
EES03161	Sorghum	nucleus	60.35	66.47
Solyc08g062700.2.1	Tomato	nucleus	56.99	65.45
KRH05304	Soybean	nucleus	56.99	65.31
HORVU3Hr1G050400.5	Barley	cytosol, nucleus	43.36	62.66
Zm00001d044297_P002	Maize	nucleus	60.71	62.59
CDX68936	Canola	nucleus	50.27	60.81
CDX75321	Canola	nucleus	52.92	60.77
Bra011410.1-P	Field mustard	nucleus	53.1	60.73
AT4G33060.1	Thale cress	nucleus	52.39	58.73
GSMUA_Achr8P32900_001	Banana	cytosol	13.81	47.56
GSMUA_Achr10P...	Banana	cytosol	18.23	18.59
GSMUA_Achr10P...	Banana	endoplasmic reticulum	7.08	17.09
GSMUA_Achr5P15930_001	Banana	mitochondrion	6.9	16.67
GSMUA_Achr1P22460_001	Banana	cytosol	15.58	14.79
GSMUA_Achr1P17040_001	Banana	cytosol	13.27	11.98

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	ncoils:Coil	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575
GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G05680_001	EnsemblPlants:GSMUA_Achr8P05680_001	EnsemblPlants:GSMUA_Achr8T05680_001	InterPro:IPR002130
InterPro:IPR029000	UniProt:M0TMX1	PFAM:PF00160	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072
PANTHER:PTHR11071	PANTHER:PTHR11071:SF152	SUPFAM:SSF50891	UniParc:UPI0002953B2B	SEG:seg	:

Description

Putative Peptidyl-prolyl cis-trans isomerase CWC27 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr8G05680_001]

Coordinates

chr8:-:3697575..3704258

Molecular Weight (calculated)

64710.4 Da

IEP (calculated)

7.238

GRAVY (calculated)

-0.922

Length

565 amino acids

Sequence
(BLAST)

001: MLRHLFYFVL TNPKFIGIVY FSDYTGFCIH VRSHIDPIRT PPPRRAVLVW SGERDRDRER ERRGRSMSSV YVLEPPTKGK VVLQTTAGPL DIELWPREAP
101: KAVRNFVQLC LEGYYDRTNF HRIIKGFLVQ GGDPTATGTG GESIYGGMFA DEFHSRLRFN HRGLVACANA GTPHSNGSQF FMTLDRSDWL DRKNTIFGKV
201: TGDSIFNLLS LGDFETDKDD RPVHPPPKIL SVEVLWNPFD DIVPRQLPEK PQSDAKVVVE GQDQKKKAVK QLNMLSFGEE VEEDEMEAAN IKEKIKSIHD
301: VLDDPRFLKE AKPEPLSSTE VEKKNEIRLA VREALTSNKV DSIREHEMDD LDADDHSDDD DEANFDARMR LQILRKRKEM GDVATHDKLP AEKTRQKDRE
401: ASPSRRNDDD TKGQNTKVEK LSMKKKGMGS EARAELMAKA DADLELLNHA EQERQLQKQK KRRNQGREED TLAKLQRFKK SLSTKLSSPS SNGSKDNNEE
501: DDSGWMATQL KFIPESSEKD GMTRKDDPNE YVVHDPLLEK GKEKFNKMQA KLKRREREWA GKSLT

Best Arabidopsis Sequence Match ( AT4G33060.1 )
(BLAST)

001: MSTVYVLEPP TKGKVIVNTT HGPIDVELWP KEAPKSVRNF VQLCLEGYFD NTIFHRVIPG FLVQGGDPTG SGTGGDSIYG GVFADEFHSR LRFSHRGIVA
101: MANASSPNSN GSQFFFTLDK CDWLDKKHTI FGKVTGDSIY NLLRLGEVDT SKDDRPLDPA PKILSVEVLW NPFEDIVPRV LAKTSEESAA EIKEPPTKPV
201: KKLNLLSFGE EAEEEEKELA VVKQKIKSSH DVLNDPRLLK AEASDKERNA SESKEVLSVR EALNAKKEAA QKDKSFSVSD TVGNSDDDDD GEDETKFDAK
301: MRNQVLSRRK EIGDTPSKPT QKKKSSSLKG REESTQRSDA VSSEDEKPRM EKLSLKKKGI GSEAKAEHME KGDTDLQLYN ASERARQLHK LKKRRLQGNE
401: DSVLAKLEKF KQSISAKPFT SSNEPVVLTS SSEPVDNKEE DLSDWKNVKL KFAPERGKDK MSRRDDPDAY MVVDPLLEKG KEKFNRMQAK QKRREREWSG
501: KSLA

Arabidopsis Description

CYP57Peptidyl-prolyl cis-trans isomerase CYP57 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q152]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.