Factsheet for HORVU3Hr1G050400.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G209000.1	Wheat	nucleus	85.17	67.27
TraesCS3B01G239300.1	Wheat	nucleus	85.17	66.6
TraesCS3D01G211900.1	Wheat	nucleus	84.91	66.53
Os01t0582400-01	Rice	extracellular	75.19	58.92
EES03161	Sorghum	nucleus	72.38	55.17
Zm00001d044297_P002	Maize	nucleus	71.36	50.91
VIT_04s0008g01370.t01	Wine grape	cytosol	56.52	44.38
Solyc08g062700.2.1	Tomato	nucleus	54.73	43.5
GSMUA_Achr8P05680_001	Banana	endoplasmic reticulum	62.66	43.36
CDX68936	Canola	nucleus	51.41	43.04
KRH05304	Soybean	nucleus	53.71	42.6
Bra011410.1-P	Field mustard	nucleus	53.45	42.31
CDX75321	Canola	nucleus	53.2	42.28
AT4G33060.1	Thale cress	nucleus	52.17	40.48
HORVU7Hr1G059320.3	Barley	plastid	19.69	38.31
HORVU6Hr1G042040.1	Barley	endoplasmic reticulum	16.37	31.07
HORVU1Hr1G040970.1	Barley	cytosol, endoplasmic reticulum, mitochondrion	18.93	30.71
HORVU1Hr1G015670.5	Barley	cytosol	18.67	30.17
HORVU7Hr1G107520.5	Barley	nucleus	23.02	16.1
HORVU2Hr1G054470.1	Barley	plastid	10.49	16.08
HORVU4Hr1G070330.9	Barley	cytosol	21.99	14.58
HORVU7Hr1G058730.3	Barley	cytosol, mitochondrion, nucleus	18.67	10.78

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A287L0F2	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575
GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G050400	EnsemblPlants:HORVU3Hr1G050400.5	InterPro:IPR002130	InterPro:IPR029000
PFAM:PF00160	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF152
SUPFAM:SSF50891	UniParc:UPI000B4720F2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:361773272..361779825

Molecular Weight (calculated)

43697.9 Da

IEP (calculated)

5.388

GRAVY (calculated)

-0.838

Length

391 amino acids

Sequence
(BLAST)

001: PNQWNHTPQD RPTCRSARVE AAAGGVGQAG KMSSVYVLEP PTKGKVVVQT TAGPIDIELW AKEAPKATRN FVQLCLEGYY DGTLFHRVIK SFLIQGGDPT
101: GSGSGGESIY GAPFADEFHS RLRFNHRGLL ACANAGTPHS NGSQFFITLD RCDWLDKKNT IFGKVTGDSI FNLLALADIE TDKDDRPVYP QKVLSVEVLW
201: NPFDDIVPRQ LTKIQPAPKA DAEKKPEKKA VKQLNVLSFG DEVEEEENEA ASFVKDKIKS IHDVLDDPRF LKVEPQAEQL SKEEEEKKNE TVLSIREALI
301: SKKADSREPE HDPENDDSPE DENEEDFDNR MRSRILKKRR ELGDIRQSQS SKKDKSHQKD KELPAHRSDD GGGGGTTTTM IINYQNHGNY P

Best Arabidopsis Sequence Match ( AT4G33060.1 )
(BLAST)

001: MSTVYVLEPP TKGKVIVNTT HGPIDVELWP KEAPKSVRNF VQLCLEGYFD NTIFHRVIPG FLVQGGDPTG SGTGGDSIYG GVFADEFHSR LRFSHRGIVA
101: MANASSPNSN GSQFFFTLDK CDWLDKKHTI FGKVTGDSIY NLLRLGEVDT SKDDRPLDPA PKILSVEVLW NPFEDIVPRV LAKTSEESAA EIKEPPTKPV
201: KKLNLLSFGE EAEEEEKELA VVKQKIKSSH DVLNDPRLLK AEASDKERNA SESKEVLSVR EALNAKKEAA QKDKSFSVSD TVGNSDDDDD GEDETKFDAK
301: MRNQVLSRRK EIGDTPSKPT QKKKSSSLKG REESTQRSDA VSSEDEKPRM EKLSLKKKGI GSEAKAEHME KGDTDLQLYN ASERARQLHK LKKRRLQGNE
401: DSVLAKLEKF KQSISAKPFT SSNEPVVLTS SSEPVDNKEE DLSDWKNVKL KFAPERGKDK MSRRDDPDAY MVVDPLLEKG KEKFNRMQAK QKRREREWSG
501: KSLA

Arabidopsis Description

CYP57Peptidyl-prolyl cis-trans isomerase CYP57 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q152]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.