Factsheet for HORVU1Hr1G040970.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, mitochondrion
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G009950.7
HORVU1Hr1G024060.21
HORVU2Hr1G019410.4
HORVU2Hr1G028210.9
HORVU2Hr1G029630.1
HORVU2Hr1G029640.1
HORVU2Hr1G126750.3
HORVU3Hr1G039480.2
HORVU3Hr1G064550.7
HORVU4Hr1G046940.7
HORVU4Hr1G088790.4
HORVU5Hr1G080170.2
HORVU5Hr1G114340.1
HORVU5Hr1G114400.2
HORVU7Hr1G037130.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53720.1	HORVU2Hr1G019410.4	AT1G09140.1	16497658
AT1G53720.1	HORVU3Hr1G064550.7	AT1G09140.1	16497658
AT1G53720.1	HORVU4Hr1G046940.7	AT1G09140.1	16497658
AT1G53720.1	HORVU1Hr1G009950.7	AT2G37340.1	16497658
AT1G53720.1	HORVU1Hr1G024060.21	AT2G37340.1	16497658
AT1G53720.1	HORVU2Hr1G028210.9	AT3G13570.1	16497658
AT1G53720.1	HORVU3Hr1G039480.2	AT3G61860.1	16497658
AT1G53720.1	HORVU4Hr1G088790.4	AT3G61860.1	16497658
AT1G53720.1	HORVU2Hr1G126750.3	AT4G35800.1	16497658
AT1G53720.1	HORVU5Hr1G114340.1	AT4G35800.1	16497658
AT1G53720.1	HORVU5Hr1G114400.2	AT4G35800.1	16497658
AT1G53720.1	HORVU7Hr1G037130.2	AT4G35800.1	16497658
AT1G53720.1	HORVU5Hr1G080170.2	AT5G62190.1	16497658
AT1G53720.1	HORVU2Hr1G029630.1	AT5G64200.2	16497658
AT1G53720.1	HORVU2Hr1G029640.1	AT5G64200.2	16497658

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G015670.5	Barley	cytosol	90.87	90.5
HORVU6Hr1G042040.1	Barley	endoplasmic reticulum	73.03	85.44
PGSC0003DMT400056014	Potato	cytosol	46.06	61.67
Zm00001d036620_P001	Maize	nucleus	76.35	41.16
Os06t0670400-00	Rice	cytosol	71.37	36.67
TraesCS7D01G457200.1	Wheat	nucleus	83.82	36.14
TraesCS7B01G371900.1	Wheat	nucleus	83.82	36.14
TraesCS7A01G469800.1	Wheat	nucleus	83.4	35.96
HORVU7Hr1G107520.5	Barley	nucleus	83.4	35.96
PGSC0003DMT400069100	Potato	cytosol	49.79	34.99
EER88795	Sorghum	cytosol	77.59	33.45
Os06t0670500-01	Rice	cytosol	75.52	32.27
GSMUA_Achr10P...	Banana	cytosol	68.88	29.96
HORVU7Hr1G059320.3	Barley	plastid	24.9	29.85
PGSC0003DMT400011166	Potato	nucleus	36.1	29.79
AT1G53720.1	Thale cress	nucleus	61.41	29.25
Bra030819.1-P	Field mustard	cytosol	61.83	27.39
CDY72459	Canola	cytosol, extracellular, plastid	13.28	27.35
PGSC0003DMT400011164	Potato	cytosol	20.75	27.03
Solyc07g066420.2.1	Tomato	nucleus	63.49	26.06
VIT_19s0027g01660.t01	Wine grape	nucleus	66.39	25.08
KRH13056	Soybean	nucleus	63.9	24.33
KRG93223	Soybean	nucleus	64.32	24.22
HORVU3Hr1G050400.5	Barley	cytosol, nucleus	30.71	18.93
CDY10512	Canola	nucleus	61.41	14.92
HORVU2Hr1G054470.1	Barley	plastid	14.52	13.73
HORVU4Hr1G070330.9	Barley	cytosol	24.9	10.17
HORVU7Hr1G058730.3	Barley	cytosol, mitochondrion, nucleus	22.41	7.98

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A287F920	InterPro:CRIP	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase
InterPro:Cyclophilin-type_PPIase_dom	InterPro:Cyclophilin_PPIL4	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
EnsemblPlantsGene:HORVU1Hr1G040970	EnsemblPlants:HORVU1Hr1G040970.1	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160	PRINTS:PR00153
PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF156	SUPFAM:SSF50891	UniParc:UPI000B4875D5	SEG:seg

Description

Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287F920]

Coordinates

chrchr1H:+:289607761..289609621

Molecular Weight (calculated)

27249.0 Da

IEP (calculated)

4.577

GRAVY (calculated)

-0.526

Length

241 amino acids

Sequence
(BLAST)

001: VLLYVMHVFS VQHLTSRGGH SLTLCFDLNR MKYYNGCLFH KVEKDFLEQS GDPTGTGSGG DSVYKFLYGD QARFFNDEIR PELRHSKTVT IAMASAGENC
101: NASQFYITLR DDVDYLDDKH TVFGTVAEGL DTLTKINEAY ADDKGRPFKD IRIKHTYILD DPFDDPPQLA ELIPENSPLG KPRDEVAEER LEDSWVPLDE
201: TVDPGQLEEL IRSKEAHANA VILESVQQLR KMGEKMGVEN T

Best Arabidopsis Sequence Match ( AT1G53720.1 )
(BLAST)

001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR

Arabidopsis Description

CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.