Factsheet for HORVU7Hr1G107520.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G009950.7
HORVU1Hr1G024060.21
HORVU2Hr1G019410.4
HORVU2Hr1G028210.9
HORVU2Hr1G029630.1
HORVU2Hr1G029640.1
HORVU2Hr1G126750.3
HORVU3Hr1G039480.2
HORVU3Hr1G064550.7
HORVU4Hr1G046940.7
HORVU4Hr1G088790.4
HORVU5Hr1G080170.2
HORVU5Hr1G114340.1
HORVU5Hr1G114400.2
HORVU7Hr1G037130.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53720.1	HORVU2Hr1G019410.4	AT1G09140.1	16497658
AT1G53720.1	HORVU3Hr1G064550.7	AT1G09140.1	16497658
AT1G53720.1	HORVU4Hr1G046940.7	AT1G09140.1	16497658
AT1G53720.1	HORVU1Hr1G009950.7	AT2G37340.1	16497658
AT1G53720.1	HORVU1Hr1G024060.21	AT2G37340.1	16497658
AT1G53720.1	HORVU2Hr1G028210.9	AT3G13570.1	16497658
AT1G53720.1	HORVU3Hr1G039480.2	AT3G61860.1	16497658
AT1G53720.1	HORVU4Hr1G088790.4	AT3G61860.1	16497658
AT1G53720.1	HORVU2Hr1G126750.3	AT4G35800.1	16497658
AT1G53720.1	HORVU5Hr1G114340.1	AT4G35800.1	16497658
AT1G53720.1	HORVU5Hr1G114400.2	AT4G35800.1	16497658
AT1G53720.1	HORVU7Hr1G037130.2	AT4G35800.1	16497658
AT1G53720.1	HORVU5Hr1G080170.2	AT5G62190.1	16497658
AT1G53720.1	HORVU2Hr1G029630.1	AT5G64200.2	16497658
AT1G53720.1	HORVU2Hr1G029640.1	AT5G64200.2	16497658

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G469800.1	Wheat	nucleus	96.42	96.42
TraesCS7D01G457200.1	Wheat	nucleus	95.89	95.89
TraesCS7B01G371900.1	Wheat	nucleus	95.53	95.53
HORVU1Hr1G040970.1	Barley	cytosol, endoplasmic reticulum, mitochondrion	35.96	83.4
HORVU1Hr1G015670.5	Barley	cytosol	35.6	82.23
Zm00001d036620_P001	Maize	nucleus	65.47	81.88
HORVU6Hr1G042040.1	Barley	endoplasmic reticulum	30.05	81.55
Os06t0670500-01	Rice	cytosol	78.89	78.19
EER88795	Sorghum	cytosol	78.0	78.0
Os06t0670400-00	Rice	cytosol	62.61	74.63
PGSC0003DMT400011164	Potato	cytosol	21.47	64.86
PGSC0003DMT400056014	Potato	cytosol	20.57	63.89
GSMUA_Achr10P...	Banana	cytosol	62.97	63.54
PGSC0003DMT400011166	Potato	nucleus	32.02	61.3
AT1G53720.1	Thale cress	nucleus	54.92	60.67
PGSC0003DMT400069100	Potato	cytosol	35.42	57.73
Bra030819.1-P	Field mustard	cytosol	54.02	55.51
Solyc07g066420.2.1	Tomato	nucleus	57.07	54.34
VIT_19s0027g01660.t01	Wine grape	nucleus	60.47	52.98
KRG93223	Soybean	nucleus	60.11	52.5
KRH13056	Soybean	nucleus	59.39	52.45
CDY72459	Canola	cytosol, extracellular, plastid	9.66	46.15
HORVU7Hr1G059320.3	Barley	plastid	11.81	32.84
CDY10512	Canola	nucleus	55.81	31.45
HORVU3Hr1G050400.5	Barley	cytosol, nucleus	16.1	23.02
HORVU2Hr1G054470.1	Barley	plastid	7.16	15.69
HORVU4Hr1G070330.9	Barley	cytosol	13.6	12.88
HORVU7Hr1G058730.3	Barley	cytosol, mitochondrion, nucleus	11.81	9.75

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	Gene3D:3.30.70.330	Gene3D:4.10.60.10	InterPro:CRIP	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	InterPro:Cyclophilin_PPIL4	GO:GO:0000413	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G107520
EnsemblPlants:HORVU7Hr1G107520.5	InterPro:IPR000504	InterPro:IPR001878	InterPro:IPR002130	InterPro:IPR012677	InterPro:IPR029000
UniProt:M0XCH8	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFAM:PF00098	PFAM:PF00160	PRINTS:PR00153
PFscan:PS50072	PFscan:PS50102	PFscan:PS50158	PANTHER:PTHR11071	PANTHER:PTHR11071:SF156	InterPro:RBD_domain_sf
InterPro:RRM_dom	SMART:SM00343	SMART:SM00360	SUPFAM:SSF50891	SUPFAM:SSF54928	SUPFAM:SSF57756
UniParc:UPI0002961138	InterPro:Znf_CCHC	InterPro:Znf_CCHC_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:-:623284878..623291176

Molecular Weight (calculated)

64151.7 Da

IEP (calculated)

6.247

GRAVY (calculated)

-1.176

Length

559 amino acids

Sequence
(BLAST)

001: MSVLIVTSVG DIELDLHTDL CPLTTKNFLK LCKMKYYNGC LFHKVEKDFL AQSGDPTGTG SGGDSVYKFL YGDQARFFND EIRPELRHSK TGTIAMASAG
101: ENCNASQFYI TLRDDVDYLD DKHTVFGTVA EGLDTLTKIN EAYVDDKGRP FKDIRIKHTY ILDDPFDDPP QLAEFIPENS PLGKPHDEVA EERLEDSWVP
201: LDETVDPGQL EELIRSKEAH ANAVILESVG DIPDAEVKPP DNVLFVCKLN PVTQDEDLYT IFSRFGSVTS AEIIRDFKTG DSLCYAFIEF EAKEACERAY
301: FKMDNCLIDD RRIHVDFSQS VSKLWGQFRQ SKRNGNKDGC FKCGAPDHIA RDCDQDGEQK PKAPNYVLKD DNTQRGGNNR RSYDFVFEDD TARRNTDRRK
401: VQKVDDQRTQ LPPRGDRDRN GSRERSQSHE KGGLQSKEAV VSRGGQRPDD HHSHDRSGGR SSGRHDDRDY SKQHSRSRNM DGGEEDYKRR SGSGRYDRDD
501: KPNGERRHRD DDDRGKGDRH RKDERDRRAR SPDADRHRRE DAGHREASRH RERRHRDDR

Best Arabidopsis Sequence Match ( AT1G53720.1 )
(BLAST)

001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR

Arabidopsis Description

CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.