Factsheet for HORVU4Hr1G070330.9

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU1Hr1G008160.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G054660.1
HORVU3Hr1G113750.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU6Hr1G023630.1
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G67530.1	HORVU0Hr1G018470.1	AT1G22920.1	21798944
AT5G67530.1	HORVU0Hr1G025410.1	AT1G22920.1	21798944
AT5G67530.1	HORVU1Hr1G008160.1	AT1G22920.1	21798944
AT5G67530.1	HORVU2Hr1G056160.5	AT1G22920.1	21798944
AT5G67530.1	HORVU2Hr1G067660.1	AT1G22920.1	21798944
AT5G67530.1	HORVU2Hr1G112000.1	AT1G22920.1	21798944
AT5G67530.1	HORVU3Hr1G021300.1	AT1G22920.1	21798944
AT5G67530.1	HORVU3Hr1G054660.1	AT1G22920.1	21798944
AT5G67530.1	HORVU3Hr1G113750.1	AT1G22920.1	21798944
AT5G67530.1	HORVU4Hr1G047410.2	AT1G22920.1	21798944
AT5G67530.1	HORVU4Hr1G048730.1	AT1G22920.1	21798944
AT5G67530.1	HORVU6Hr1G023630.1	AT1G22920.1	21798944
AT5G67530.1	HORVU7Hr1G078010.1	AT1G22920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G259800.1	Wheat	cytosol	98.64	98.48
TraesCS4B01G260100.1	Wheat	cytosol	98.47	98.47
TraesCS4A01G045200.1	Wheat	cytosol	98.31	98.31
EER92686	Sorghum	cytosol	88.47	88.32
Os03t0201100-01	Rice	cytosol	21.53	85.23
Zm00001d028109_P006	Maize	cytosol	87.8	77.89
KRH77127	Soybean	nucleus	77.46	76.55
KRH28354	Soybean	nucleus	77.12	76.21
GSMUA_Achr1P22460_001	Banana	cytosol	76.78	76.13
VIT_07s0129g00040.t01	Wine grape	cytosol	76.44	75.54
Solyc02g092380.2.1	Tomato	nucleus	75.25	74.5
PGSC0003DMT400055240	Potato	cytosol	75.25	74.5
VIT_00s0513g00020.t01	Wine grape	cytosol	41.19	73.41
CDY36499	Canola	cytosol	73.05	72.19
CDY08725	Canola	cytosol	72.88	72.03
Bra024442.1-P	Field mustard	cytosol	72.71	71.86
AT5G67530.1	Thale cress	cytosol	72.37	71.76
HORVU7Hr1G059320.3	Barley	plastid	12.2	35.82
HORVU6Hr1G042040.1	Barley	endoplasmic reticulum	10.51	30.1
HORVU1Hr1G015670.5	Barley	cytosol	10.34	25.21
HORVU1Hr1G040970.1	Barley	cytosol, endoplasmic reticulum, mitochondrion	10.17	24.9
HORVU3Hr1G050400.5	Barley	cytosol, nucleus	14.58	21.99
HORVU7Hr1G058730.3	Barley	cytosol, mitochondrion, nucleus	24.41	21.27
HORVU2Hr1G054470.1	Barley	plastid	7.63	17.65
HORVU7Hr1G107520.5	Barley	nucleus	12.88	13.6

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	Gene3D:3.30.40.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0004842
GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G070330	EnsemblPlants:HORVU4Hr1G070330.9	InterPro:IPR002130
InterPro:IPR003613	InterPro:IPR013083	InterPro:IPR029000	UniProt:M0USA0	PFAM:PF00160	PRINTS:PR00153
ScanProsite:PS00170	PFscan:PS50072	PFscan:PS51698	PANTHER:PTHR11071	PANTHER:PTHR11071:SF147	SMART:SM00504
SUPFAM:SSF50891	SUPFAM:SSF57850	UniParc:UPI00029650DB	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

No Description!

Coordinates

chrchr4H:-:574972344..574976289

Molecular Weight (calculated)

64907.6 Da

IEP (calculated)

7.667

GRAVY (calculated)

-0.572

Length

590 amino acids

Sequence
(BLAST)

001: MGKKQHSKDR MFITATEWAT EWGGAKNREA IAPFQRLPFY CCALTFLPFE DPVCTADGSV FDLMSIIPYI KKFGKHPVTG AALKQEDLIP LTFHKNTDGE
101: FQCPVLNKVF TEFTHIVAVK TTGNVFCYEA IQELNIKPKN WKELLTDEPF ARKDLITIQN PNALDTKVLG QFDHVRQGLK LDDEELQRMK DDPTYNINVA
201: GDLKQMMKEL GTEKGKLAFL HGGGGQKAQK ERAAALAVLL AKEEKSDSKS SKEPKPPQPF SVVDAASASV HGRSAAAAKS GTAEKTAARI AMHRAGDRDP
301: INAKLVKSRY TTGAASRSFT STSYDPVTKN EYEYVKVERN PKKKGYVQLH TTHGDLNLEL HCDITPRTCE NFLTHCENGY YNGLIFHRSI KNFMIQGGDP
401: TGTGSGGESI WGQPFKDELN SKLLHSGRGV VSMANSGPHT NGSQFFILYK SATHLNFKHT VFGMVVGGLH NLSAMEKVPV DDDDRPLEEI KLLKVSVFVN
501: PYTEPDEEEE KAKQEEKDKD EDHDKVGSWY SNPGTGVSAS TSAGGGVGKY LKARTAGSAD VTGNAAAADD SSKKRKPSAP SVEFKDFSGW

Best Arabidopsis Sequence Match ( AT5G67530.1 )
(BLAST)

001: MGKKQHSKDR MFITKTEWAT EWGGAKSKEN RTPFKSLPYY CCALTFLPFE DPVCTIDGSV FEITTIVPYI RKFGKHPVTG APLKGEDLIP LIFHKNSEGE
101: YHCPVLNKVF TEFTHIVAVK TTGNVFCYEA IKELNIKTKN WKELLTEEPF TRADLITIQN PNAVDGKVTV EFDHVKNGLK IDDEELKKMN SDPAYNINVS
201: GDIKHMLADL GTDKAKEIAL HGGGGNKARN ERAAAIAAIL ESRSKIKEVS KAEQPKQTYS VVDAASASVF GRSADAAKAG SSDKTAARIA MHMAGDRTPV
301: NSKMVKSRYS SGAASRSFTS SAFTPVTKND FELIKVEKNP KKKGYVQFQT THGDLNIELH CDIAPRACEN FITLCERGYY NGVAFHRSIR NFMIQGGDPT
401: GTGKGGESIW GKPFKDEPNS KLLHSGRGVV SMANSGPHTN GSQFFVLYKS ATHLNYKHTV FGGVVGGLAT LAAMENVPVD ESDRPLEEIK IIEASVFVNP
501: YTELDEEEEK EKAEKEKNED KDIEKIGSWY SNPGSGTTEA GAGGGGVGKY LKAMSSTATK DTKGSLDSDI STIGVSKKRK TTASASTGFK DFSSW

Arabidopsis Description

CYP65Peptidyl-prolyl cis-trans isomerase CYP65 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.