Factsheet for Bra024442.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012239.1-P
Bra012351.1-P
Bra024548.1-P
Bra025833.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G67530.1	Bra012239.1-P	AT1G20630.1	21798944
AT5G67530.1	Bra025833.1-P	AT1G20630.1	21798944
AT5G67530.1	Bra012351.1-P	AT1G22920.1	21798944
AT5G67530.1	Bra024548.1-P	AT1G22920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08725	Canola	cytosol	99.33	99.33
AT5G67530.1	Thale cress	cytosol	91.62	91.93
Os03t0201100-01	Rice	cytosol	19.93	79.87
VIT_07s0129g00040.t01	Wine grape	cytosol	76.05	76.05
KRH77127	Soybean	nucleus	76.05	76.05
KRH28354	Soybean	nucleus	75.88	75.88
EER92686	Sorghum	cytosol	74.2	74.96
Solyc02g092380.2.1	Tomato	nucleus	74.71	74.83
PGSC0003DMT400055240	Potato	cytosol	74.37	74.5
VIT_00s0513g00020.t01	Wine grape	cytosol	40.87	73.72
GSMUA_Achr1P22460_001	Banana	cytosol	72.86	73.11
TraesCS4B01G260100.1	Wheat	cytosol	72.19	73.05
TraesCS4A01G045200.1	Wheat	cytosol	72.03	72.88
TraesCS4D01G259800.1	Wheat	cytosol	72.03	72.76
HORVU4Hr1G070330.9	Barley	cytosol	71.86	72.71
Zm00001d028109_P006	Maize	cytosol	73.53	66.02
Bra032657.1-P	Field mustard	cytosol	14.07	52.5
Bra005297.1-P	Field mustard	cytosol	12.4	45.12
Bra029595.1-P	Field mustard	mitochondrion, plastid	8.38	21.19
Bra019430.1-P	Field mustard	cytosol	21.27	20.42
Bra011410.1-P	Field mustard	nucleus	15.08	18.22
Bra030819.1-P	Field mustard	cytosol	12.9	14.15

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	Gene3D:3.30.40.10	EnsemblPlantsGene:Bra024442	EnsemblPlants:Bra024442.1	EnsemblPlants:Bra024442.1-P
InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0004842	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0016853	GO:GO:0019538
InterPro:IPR002130	InterPro:IPR003613	InterPro:IPR013083	InterPro:IPR029000	UniProt:M4E6N8	PFAM:PF00160
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PFscan:PS51698	PANTHER:PTHR11071	PANTHER:PTHR11071:SF147
SMART:SM00504	SUPFAM:SSF50891	SUPFAM:SSF57850	UniParc:UPI000253EF15	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

AT5G67530 (E=7e-285) | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein

Coordinates

chrA06:-:15789422..15792109

Molecular Weight (calculated)

65047.5 Da

IEP (calculated)

7.846

GRAVY (calculated)

-0.552

Length

597 amino acids

Sequence
(BLAST)

001: MGKKQHSKDR MFITKTEWAT EWGGAKSKEN RTPFKSLPFY CCALTFLPFE DPVCTTDGSV FELTTIVPYI RKFGKHPVTG APLKGDDLIP LVFHKNSEGE
101: FHCPVLNKVF TEFTHIVAVK TTGNVFCYEA IKELNIKTKN WKELLTEEPF TRADLITIQN PNAVDSKITV EFDHVKNGLK LEDEELKKMN SDPAYNINAS
201: GDIKHMLADL GTDKAKEIAL HGGGGNKARN ERAAAIAAIL ESRSKIKESS KADEPKQTYS VVDAASASVH GRSASAAKAG SSDKTAARIA MHMSGDRAPI
301: NTKMVKSRYS SGAASRSFTS TAFTPVTEND FELIKVEKNP TKKGYVQFRT THGDLNIELH CDIAPRACEN FITLCERGYY NGVAFHRSIR NFMIQGGDPT
401: GTGKGGESIW GKPFKDEPNS KQLHSGRGVV SMANSGPHTN GSQFFILYKS ATHLNYKHTV FGGVVGGLST LAAMESVPVD ETDRPLEEIK IIEANVFVNP
501: YTEPDEEEEE KEKAEKEKNE DKDIEKVGSW YSNPGSGTAE GGAGTGGVGK YLKAKSNAAT KETSGATDSD IAATAVSKKR KTTSASGSTG FKDFSGW

Best Arabidopsis Sequence Match ( AT5G67530.1 )
(BLAST)

001: MGKKQHSKDR MFITKTEWAT EWGGAKSKEN RTPFKSLPYY CCALTFLPFE DPVCTIDGSV FEITTIVPYI RKFGKHPVTG APLKGEDLIP LIFHKNSEGE
101: YHCPVLNKVF TEFTHIVAVK TTGNVFCYEA IKELNIKTKN WKELLTEEPF TRADLITIQN PNAVDGKVTV EFDHVKNGLK IDDEELKKMN SDPAYNINVS
201: GDIKHMLADL GTDKAKEIAL HGGGGNKARN ERAAAIAAIL ESRSKIKEVS KAEQPKQTYS VVDAASASVF GRSADAAKAG SSDKTAARIA MHMAGDRTPV
301: NSKMVKSRYS SGAASRSFTS SAFTPVTKND FELIKVEKNP KKKGYVQFQT THGDLNIELH CDIAPRACEN FITLCERGYY NGVAFHRSIR NFMIQGGDPT
401: GTGKGGESIW GKPFKDEPNS KLLHSGRGVV SMANSGPHTN GSQFFVLYKS ATHLNYKHTV FGGVVGGLAT LAAMENVPVD ESDRPLEEIK IIEASVFVNP
501: YTELDEEEEK EKAEKEKNED KDIEKIGSWY SNPGSGTTEA GAGGGGVGKY LKAMSSTATK DTKGSLDSDI STIGVSKKRK TTASASTGFK DFSSW

Arabidopsis Description

CYP65Peptidyl-prolyl cis-trans isomerase CYP65 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.