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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75068 Canola cytosol 100.0 100.0
CDX84155 Canola cytosol 100.0 100.0
AT2G36130.1 Thale cress cytosol 95.12 95.12
KRH67956 Soybean endoplasmic reticulum, nucleus 88.41 88.41
VIT_08s0007g02900.t01 Wine grape cytosol 88.41 87.35
GSMUA_Achr8P32900_001 Banana cytosol 86.59 86.59
Solyc09g010190.2.1 Tomato nucleus 84.76 84.76
EES14084 Sorghum cytosol 84.76 84.76
PGSC0003DMT400022853 Potato cytosol 84.76 84.76
Os08t0559400-01 Rice cytosol, nucleus 84.15 84.15
TraesCS7D01G279100.1 Wheat cytosol 83.54 83.54
TraesCS7B01G180900.1 Wheat cytosol 83.54 83.54
TraesCS7A01G279300.1 Wheat cytosol, nucleus 82.32 82.32
Zm00001d031937_P001 Maize cytosol 73.78 69.54
HORVU7Hr1G059320.3 Barley plastid 83.54 68.16
KRG96215 Soybean nucleus 86.59 64.25
Bra032657.1-P Field mustard cytosol 48.17 49.38
Bra029595.1-P Field mustard mitochondrion, plastid 25.0 17.37
Bra011410.1-P Field mustard nucleus 45.73 15.18
Bra019430.1-P Field mustard cytosol 50.61 13.34
Bra024442.1-P Field mustard cytosol 45.12 12.4
Bra030819.1-P Field mustard cytosol 40.85 12.32
Protein Annotations
MapMan:18.12.1Gene3D:2.40.100.10EnsemblPlantsGene:Bra005297EnsemblPlants:Bra005297.1EnsemblPlants:Bra005297.1-PInterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIaseInterPro:Cyclophilin-type_PPIase_CSInterPro:Cyclophilin-type_PPIase_domGO:GO:0000413GO:GO:0003674GO:GO:0003755
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0006457GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016853
GO:GO:0019538InterPro:IPR002130InterPro:IPR029000UniProt:M4CM60PFAM:PF00160PIRSF:PIRSF001467
PRINTS:PR00153ScanProsite:PS00170PFscan:PS50072PANTHER:PTHR11071PANTHER:PTHR11071:SF213SUPFAM:SSF50891
UniParc:UPI0002547C74SEG:seg::::
Description
AT2G36130 (E=8e-082) | peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative
Coordinates
chrA05:-:4613781..4614966
Molecular Weight (calculated)
18158.8 Da
IEP (calculated)
9.107
GRAVY (calculated)
-0.455
Length
164 amino acids
Sequence
(BLAST)
001: MTARPEGSPP EVTLETSMGP FTVEMYYKHS PRTCRNFVEL SRRGYYDNVL FHRIIKDFIV QGGDPTGTGR GGQSIYGSKF EDEIKPELKH TGAGILSMAN
101: AGPNTNGSQF FITLAPAPSL DGKHTIFGRV CRGMEVIKRL GSVQTDNTDR PIHEVKILRT KVVD
Best Arabidopsis Sequence Match ( AT2G36130.1 )
(BLAST)
001: MSARPEGSPP EVTLETSMGP FTVEMYYKHS PRTCRNFLEL SRRGYYDNVL FHRIVKDFIV QGGDPTGTGR GGESIYGSKF EDEINKELKH TGAGILSMAN
101: AGPNTNGSQF FITLAPQPSL DGKHTIFGRV CRGMEVIKRL GSVQTDNTDR PIHEVKILRT KVID
Arabidopsis Description
CYP18-2Peptidyl-prolyl cis-trans isomerase CYP18-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.