CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005297.1-P	Field mustard	cytosol	100.0	100.0
CDX84155	Canola	cytosol	100.0	100.0
AT2G36130.1	Thale cress	cytosol	95.12	95.12
KRH67956	Soybean	endoplasmic reticulum, nucleus	88.41	88.41
VIT_08s0007g02900.t01	Wine grape	cytosol	88.41	87.35
GSMUA_Achr8P32900_001	Banana	cytosol	86.59	86.59
Solyc09g010190.2.1	Tomato	nucleus	84.76	84.76
PGSC0003DMT400022853	Potato	cytosol	84.76	84.76
EES14084	Sorghum	cytosol	84.76	84.76
Os08t0559400-01	Rice	cytosol, nucleus	84.15	84.15
TraesCS7D01G279100.1	Wheat	cytosol	83.54	83.54
TraesCS7B01G180900.1	Wheat	cytosol	83.54	83.54
TraesCS7A01G279300.1	Wheat	cytosol, nucleus	82.32	82.32
Zm00001d031937_P001	Maize	cytosol	73.78	69.54
HORVU7Hr1G059320.3	Barley	plastid	83.54	68.16
KRG96215	Soybean	nucleus	86.59	64.25
CDY38037	Canola	mitochondrion, plastid	47.56	40.41
CDY30664	Canola	endoplasmic reticulum, extracellular, nucleus	18.9	32.98
CDY72459	Canola	cytosol, extracellular, plastid	18.9	26.5
CDY05284	Canola	endoplasmic reticulum, mitochondrion, plastid	25.0	17.52
CDY24675	Canola	endoplasmic reticulum, mitochondrion, plastid	24.39	17.09
CDX68936	Canola	nucleus	45.73	16.06
CDX83335	Canola	mitochondrion, plastid	22.56	16.02
CDX75321	Canola	nucleus	45.73	15.24
CDY08708	Canola	cytosol	50.61	13.34
CDX99192	Canola	cytosol	50.61	13.34
CDY36499	Canola	cytosol	45.73	12.56
CDY08725	Canola	cytosol	45.12	12.4
CDY10512	Canola	nucleus	41.46	6.85
CDY69933	Canola	cytosol, nucleus	0.0	0.0

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	GO:A0A078D4T9	EnsemblPlants:CDX75068	ProteinID:CDX75068	ProteinID:CDX75068.1
InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00117102001	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160
PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF213
SUPFAM:SSF50891	UniParc:UPI0002547C74	SEG:seg	:	:	:

Description

BnaA05g08140D

Coordinates

chrLK031802:-:2301886..2303314

Molecular Weight (calculated)

18158.8 Da

IEP (calculated)

9.107

GRAVY (calculated)

-0.455

Length

164 amino acids

Sequence
(BLAST)

001: MTARPEGSPP EVTLETSMGP FTVEMYYKHS PRTCRNFVEL SRRGYYDNVL FHRIIKDFIV QGGDPTGTGR GGQSIYGSKF EDEIKPELKH TGAGILSMAN
101: AGPNTNGSQF FITLAPAPSL DGKHTIFGRV CRGMEVIKRL GSVQTDNTDR PIHEVKILRT KVVD

Best Arabidopsis Sequence Match ( AT2G36130.1 )
(BLAST)

001: MSARPEGSPP EVTLETSMGP FTVEMYYKHS PRTCRNFLEL SRRGYYDNVL FHRIVKDFIV QGGDPTGTGR GGESIYGSKF EDEINKELKH TGAGILSMAN
101: AGPNTNGSQF FITLAPQPSL DGKHTIFGRV CRGMEVIKRL GSVQTDNTDR PIHEVKILRT KVID

Arabidopsis Description

CYP18-2Peptidyl-prolyl cis-trans isomerase CYP18-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.