Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005297.1-P | Field mustard | cytosol | 95.12 | 95.12 |
| CDX75068 | Canola | cytosol | 95.12 | 95.12 |
| CDX84155 | Canola | cytosol | 95.12 | 95.12 |
| KRH67956 | Soybean | endoplasmic reticulum, nucleus | 87.8 | 87.8 |
| VIT_08s0007g02900.t01 | Wine grape | cytosol | 87.2 | 86.14 |
| GSMUA_Achr8P32900_001 | Banana | cytosol | 85.37 | 85.37 |
| Solyc09g010190.2.1 | Tomato | nucleus | 84.15 | 84.15 |
| PGSC0003DMT400022853 | Potato | cytosol | 84.15 | 84.15 |
| Os08t0559400-01 | Rice | cytosol, nucleus | 84.15 | 84.15 |
| EES14084 | Sorghum | cytosol | 83.54 | 83.54 |
| TraesCS7D01G279100.1 | Wheat | cytosol | 82.32 | 82.32 |
| TraesCS7B01G180900.1 | Wheat | cytosol | 81.71 | 81.71 |
| TraesCS7A01G279300.1 | Wheat | cytosol, nucleus | 81.1 | 81.1 |
| Zm00001d031937_P001 | Maize | cytosol | 72.56 | 68.39 |
| HORVU7Hr1G059320.3 | Barley | plastid | 82.32 | 67.16 |
| KRG96215 | Soybean | nucleus | 85.98 | 63.8 |
| AT1G01940.1 | Thale cress | cytosol | 48.17 | 49.38 |
| AT2G47320.1 | Thale cress | golgi, mitochondrion | 26.22 | 18.7 |
| AT3G66654.3 | Thale cress | plastid | 24.39 | 16.95 |
| AT4G33060.1 | Thale cress | nucleus | 46.34 | 15.08 |
| AT1G53720.1 | Thale cress | nucleus | 40.24 | 13.04 |
| AT3G44600.1 | Thale cress | cytosol | 49.39 | 12.84 |
| AT5G67530.1 | Thale cress | cytosol | 43.9 | 12.1 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | EntrezGene:818186 | ProteinID:AAD26970.1 | ProteinID:AEC09209.1 | EMBL:AF389280 |
| ArrayExpress:AT2G36130 | EnsemblPlantsGene:AT2G36130 | RefSeq:AT2G36130 | TAIR:AT2G36130 | RefSeq:AT2G36130-TAIR-G | EnsemblPlants:AT2G36130.1 |
| TAIR:AT2G36130.1 | EMBL:AY085003 | EMBL:AY102153 | EMBL:AY568516 | Unigene:At.14426 | InterPro:Cyclophilin-like_dom_sf |
| InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 |
| GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 | RefSeq:NP_181157.1 | PFAM:PF00160 | PIRSF:PIRSF001467 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF213 |
| UniProt:Q9SIH1 | SUPFAM:SSF50891 | UniParc:UPI000009F745 | SEG:seg | : | : |
Description
CYP18-2Peptidyl-prolyl cis-trans isomerase CYP18-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH1]
Coordinates
chr2:+:15166720..15168497
Molecular Weight (calculated)
18233.8 Da
IEP (calculated)
8.693
GRAVY (calculated)
-0.502
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MSARPEGSPP EVTLETSMGP FTVEMYYKHS PRTCRNFLEL SRRGYYDNVL FHRIVKDFIV QGGDPTGTGR GGESIYGSKF EDEINKELKH TGAGILSMAN
101: AGPNTNGSQF FITLAPQPSL DGKHTIFGRV CRGMEVIKRL GSVQTDNTDR PIHEVKILRT KVID
101: AGPNTNGSQF FITLAPQPSL DGKHTIFGRV CRGMEVIKRL GSVQTDNTDR PIHEVKILRT KVID
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.