Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83335 | Canola | mitochondrion, plastid | 83.48 | 83.12 |
| AT3G66654.3 | Thale cress | plastid | 50.43 | 49.15 |
| AT1G01940.1 | Thale cress | cytosol | 21.3 | 30.62 |
| AT2G36130.1 | Thale cress | cytosol | 18.7 | 26.22 |
| AT3G44600.1 | Thale cress | cytosol | 28.7 | 10.46 |
| AT5G67530.1 | Thale cress | cytosol | 22.17 | 8.57 |
| AT1G53720.1 | Thale cress | nucleus | 17.39 | 7.91 |
| AT4G33060.1 | Thale cress | nucleus | 16.52 | 7.54 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | EntrezGene:819345 | ProteinID:AAB63832.1 | ProteinID:AEC10827.1 | EMBL:AK318997 |
| ArrayExpress:AT2G47320 | EnsemblPlantsGene:AT2G47320 | RefSeq:AT2G47320 | TAIR:AT2G47320 | RefSeq:AT2G47320-TAIR-G | EnsemblPlants:AT2G47320.1 |
| TAIR:AT2G47320.1 | EMBL:AY050450 | EMBL:AY097351 | EMBL:AY568520 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase |
| InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005794 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016853 |
| GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 | RefSeq:NP_182254.1 | PFAM:PF00160 | PIRSF:PIRSF001467 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00153 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF200 | UniProt:Q94A16 |
| SUPFAM:SSF50891 | TMHMM:TMhelix | UniParc:UPI000004867C | SEG:seg | : | : |
Description
CYP21-3Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94A16]
Coordinates
chr2:+:19427316..19428933
Molecular Weight (calculated)
26043.4 Da
IEP (calculated)
7.666
GRAVY (calculated)
-0.221
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKIKPQALL QQSKKKKGPS RISITNIVIY TLAVLLLVFV LFSAYRRWTH RSEIPTHNGR SVLEDAAFPG MKNVDLPRFA TLDTGKGSVT IELFKDTAPN
101: VVDQFMKFCQ DGYFKGFLFS RVVKHFVIQA GDSAEFDAVK DWALDRKNID TSLKHEEFMV GTPKAKNEQG GFEFFIVSAQ IKDLNEKLTV FGRVSKGQDV
201: VQEIEEVETD DQYQPKSPIE IMSVTLLQDM
101: VVDQFMKFCQ DGYFKGFLFS RVVKHFVIQA GDSAEFDAVK DWALDRKNID TSLKHEEFMV GTPKAKNEQG GFEFFIVSAQ IKDLNEKLTV FGRVSKGQDV
201: VQEIEEVETD DQYQPKSPIE IMSVTLLQDM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.