Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05284 | Canola | endoplasmic reticulum, mitochondrion, plastid | 88.14 | 88.89 |
| CDY24675 | Canola | endoplasmic reticulum, mitochondrion, plastid | 87.29 | 88.03 |
| Bra029595.1-P | Field mustard | mitochondrion, plastid | 83.47 | 83.47 |
| KRH49483 | Soybean | mitochondrion | 56.78 | 59.56 |
| GSMUA_Achr5P15930_001 | Banana | mitochondrion | 58.9 | 59.4 |
| KRG89165 | Soybean | endoplasmic reticulum | 56.78 | 58.26 |
| KRH34786 | Soybean | endoplasmic reticulum | 57.2 | 58.19 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 57.2 | 57.69 |
| Solyc09g008410.2.1 | Tomato | plastid | 56.78 | 56.78 |
| PGSC0003DMT400009946 | Potato | mitochondrion | 55.93 | 55.93 |
| VIT_05s0077g01040.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 66.95 | 55.83 |
| Zm00001d021332_P002 | Maize | mitochondrion | 55.08 | 55.79 |
| KXG36207 | Sorghum | mitochondrion | 55.08 | 55.79 |
| Solyc10g083930.1.1 | Tomato | nucleus | 53.39 | 54.78 |
| PGSC0003DMT400072698 | Potato | mitochondrion, plastid | 52.54 | 53.91 |
| Os07t0476500-01 | Rice | mitochondrion | 52.97 | 53.19 |
| TraesCS2B01G255000.1 | Wheat | mitochondrion | 51.69 | 52.36 |
| TraesCS2D01G237600.1 | Wheat | mitochondrion | 50.42 | 51.07 |
| AT2G47320.1 | Thale cress | golgi, mitochondrion | 49.15 | 50.43 |
| KRG91995 | Soybean | endoplasmic reticulum, mitochondrion, plastid | 57.63 | 46.58 |
| HORVU2Hr1G054470.1 | Barley | plastid | 39.83 | 36.86 |
| AT1G01940.1 | Thale cress | cytosol | 17.37 | 25.62 |
| AT2G36130.1 | Thale cress | cytosol | 16.95 | 24.39 |
| AT3G44600.1 | Thale cress | cytosol | 26.27 | 9.83 |
| AT4G33060.1 | Thale cress | nucleus | 15.25 | 7.14 |
| AT1G53720.1 | Thale cress | nucleus | 15.25 | 7.11 |
| AT5G67530.1 | Thale cress | cytosol | 17.8 | 7.06 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | EntrezGene:819847 | UniProt:A0A178VHR2 | ProteinID:AAG50994.1 | ProteinID:AEE74429.1 |
| ProteinID:AEE74430.1 | ProteinID:AEE74431.1 | EMBL:AK117708 | ProteinID:ANM64487.1 | ProteinID:ANM64488.1 | ArrayExpress:AT3G66654 |
| EnsemblPlantsGene:AT3G66654 | RefSeq:AT3G66654 | TAIR:AT3G66654 | RefSeq:AT3G66654-TAIR-G | EnsemblPlants:AT3G66654.3 | TAIR:AT3G66654.3 |
| EMBL:AY568521 | Unigene:At.43980 | EMBL:BT005430 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_dom |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 | RefSeq:NP_001326512.1 | RefSeq:NP_001326513.1 |
| RefSeq:NP_187319.1 | RefSeq:NP_974240.1 | RefSeq:NP_974241.1 | ProteinID:OAP04865.1 | PFAM:PF00160 | PIRSF:PIRSF001467 |
| PO:PO:0000293 | PRINTS:PR00153 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF200 | UniProt:Q9C835 |
| SUPFAM:SSF50891 | TMHMM:TMhelix | UniParc:UPI000000C64F | : | : | : |
Description
CYP21-4Peptidyl-prolyl cis-trans isomerase CYP21-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C835]
Coordinates
chr3:+:2087916..2090518
Molecular Weight (calculated)
26428.9 Da
IEP (calculated)
9.406
GRAVY (calculated)
-0.364
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKIKPQALL NQSKKKKGPS RISISTIIVC NLVVAVVILS LVTTYRHWSQ RSRNTIEHET RSQRFEDTNT ASGQKTYDLP GFADINTSKG LITVELFKEG
101: SPEVVDKFLD LCQKDHFKGM PFQRVIKNYL VQAGHSPSSI PVEEWTAKGK LRGRLHIGPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NDQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSPIGITGV VLKLET
101: SPEVVDKFLD LCQKDHFKGM PFQRVIKNYL VQAGHSPSSI PVEEWTAKGK LRGRLHIGPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NDQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSPIGITGV VLKLET
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.