Factsheet for HORVU2Hr1G054470.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G237600.1	Wheat	mitochondrion	70.59	77.25
TraesCS2B01G255000.1	Wheat	mitochondrion	70.2	76.82
Os07t0476500-01	Rice	mitochondrion	60.0	65.11
KXG36207	Sorghum	mitochondrion	57.25	62.66
Zm00001d021332_P002	Maize	mitochondrion	56.08	61.37
GSMUA_Achr10P...	Banana	endoplasmic reticulum	43.53	47.44
GSMUA_Achr5P15930_001	Banana	mitochondrion	41.57	45.3
KRH34786	Soybean	endoplasmic reticulum	39.61	43.53
CDY05284	Canola	endoplasmic reticulum, mitochondrion, plastid	39.61	43.16
KRG89165	Soybean	endoplasmic reticulum	38.82	43.04
KRH49483	Soybean	mitochondrion	37.65	42.67
CDY24675	Canola	endoplasmic reticulum, mitochondrion, plastid	38.82	42.31
Bra029595.1-P	Field mustard	mitochondrion, plastid	38.43	41.53
VIT_05s0077g01040.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	44.71	40.28
AT3G66654.3	Thale cress	plastid	36.86	39.83
PGSC0003DMT400009946	Potato	mitochondrion	36.86	39.83
Solyc10g083930.1.1	Tomato	nucleus	35.69	39.57
PGSC0003DMT400072698	Potato	mitochondrion, plastid	35.69	39.57
Solyc09g008410.2.1	Tomato	plastid	36.08	38.98
KRG91995	Soybean	endoplasmic reticulum, mitochondrion, plastid	40.0	34.93
HORVU7Hr1G059320.3	Barley	plastid	16.47	20.9
HORVU6Hr1G042040.1	Barley	endoplasmic reticulum	13.73	16.99
HORVU1Hr1G040970.1	Barley	cytosol, endoplasmic reticulum, mitochondrion	13.73	14.52
HORVU1Hr1G015670.5	Barley	cytosol	12.94	13.64
HORVU3Hr1G050400.5	Barley	cytosol, nucleus	16.08	10.49
HORVU7Hr1G058730.3	Barley	cytosol, mitochondrion, nucleus	20.78	7.83
HORVU4Hr1G070330.9	Barley	cytosol	17.65	7.63
HORVU7Hr1G107520.5	Barley	nucleus	15.69	7.16

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A287I1J6	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005886
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016853
GO:GO:0019538	EnsemblPlantsGene:HORVU2Hr1G054470	EnsemblPlants:HORVU2Hr1G054470.1	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160
PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF200	SUPFAM:SSF50891	UniParc:UPI000B47772D	:

Description

No Description!

Coordinates

chrchr2H:-:335096849..335132599

Molecular Weight (calculated)

28133.0 Da

IEP (calculated)

7.508

GRAVY (calculated)

-0.196

Length

255 amino acids

Sequence
(BLAST)

001: PNSTRLISAS KLNAAKLPLR LLPCRSLESP QTPRSRPNLR TPCPNTPTLA RVADIAVPAV STPSAIFGHR GLRPAFEAQM DLPRAENVEI SEDSTKISTP
101: RYAIMDTLRG SITIEISKDA SAGVVDRFIN LCKIDYFKGM PFRHVIKNFL IQGGDFDLNG AAQEWILKAK ASGENSLSPK HEAFMIGTTR SPNNKGFDLF
201: ITTAPIPDLS DKIILFGRVI KGEDIVQEIE EIDTDEHYQP KTPIGIINIM LIQEL

Best Arabidopsis Sequence Match ( AT3G66654.4 )
(BLAST)

001: MAKIKPQALL NQSKKKKGPS RISISTIIVC NLVVAVVILS LVTTYRHWSQ RSRNTIEHET RSQRFEDTNT ASGQKTYDLP GFADINTSKG LITVELFKEG
101: SPEVVDKFLD LCQKDHFKGM PFQRVIKNYL VQAGHSPSSI PVEEWTAKGK LRGRLHIGPK HEAFMLGTPK NKGNNKDFEL LITTAPIPDL NDQLIVFGRV
201: LKGEDVVQEI EEVDTDEHFQ PKSPIGITGV VLKLET

Arabidopsis Description

CYP21-4Peptidyl-prolyl cis-trans isomerase CYP21-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.