Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 4
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G015670.5 | Barley | cytosol | 91.26 | 77.69 |
| HORVU1Hr1G040970.1 | Barley | cytosol, endoplasmic reticulum, mitochondrion | 85.44 | 73.03 |
| PGSC0003DMT400056014 | Potato | cytosol | 49.03 | 56.11 |
| Zm00001d036620_P001 | Maize | nucleus | 77.18 | 35.57 |
| Os06t0670400-00 | Rice | cytosol | 72.82 | 31.98 |
| TraesCS7D01G457200.1 | Wheat | nucleus | 81.55 | 30.05 |
| TraesCS7B01G371900.1 | Wheat | nucleus | 81.55 | 30.05 |
| HORVU7Hr1G107520.5 | Barley | nucleus | 81.55 | 30.05 |
| PGSC0003DMT400069100 | Potato | cytosol | 50.0 | 30.03 |
| TraesCS7A01G469800.1 | Wheat | nucleus | 81.07 | 29.87 |
| HORVU7Hr1G059320.3 | Barley | plastid | 28.64 | 29.35 |
| CDY72459 | Canola | cytosol, extracellular, plastid | 16.5 | 29.06 |
| EER88795 | Sorghum | cytosol | 77.18 | 28.44 |
| Os06t0670500-01 | Rice | cytosol | 74.76 | 27.3 |
| PGSC0003DMT400011164 | Potato | cytosol | 23.3 | 25.95 |
| AT1G53720.1 | Thale cress | nucleus | 63.59 | 25.89 |
| GSMUA_Achr10P... | Banana | cytosol | 68.93 | 25.63 |
| PGSC0003DMT400011166 | Potato | nucleus | 34.47 | 24.32 |
| Bra030819.1-P | Field mustard | cytosol | 64.08 | 24.26 |
| Solyc07g066420.2.1 | Tomato | nucleus | 65.05 | 22.83 |
| VIT_19s0027g01660.t01 | Wine grape | nucleus | 67.96 | 21.94 |
| KRH13056 | Soybean | nucleus | 66.02 | 21.48 |
| KRG93223 | Soybean | nucleus | 66.02 | 21.25 |
| HORVU3Hr1G050400.5 | Barley | cytosol, nucleus | 31.07 | 16.37 |
| HORVU2Hr1G054470.1 | Barley | plastid | 16.99 | 13.73 |
| CDY10512 | Canola | nucleus | 64.08 | 13.31 |
| HORVU4Hr1G070330.9 | Barley | cytosol | 30.1 | 10.51 |
| HORVU7Hr1G058730.3 | Barley | cytosol, mitochondrion, nucleus | 25.73 | 7.83 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | UniProt:A0A287U2A5 | InterPro:CRIP | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase |
| InterPro:Cyclophilin-type_PPIase_dom | InterPro:Cyclophilin_PPIL4 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU6Hr1G042040 | EnsemblPlants:HORVU6Hr1G042040.1 | InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 | PRINTS:PR00153 |
| PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF156 | SUPFAM:SSF50891 | UniParc:UPI000B478E8E | : |
Description
Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287U2A5]
Coordinates
chrchr6H:+:232719254..232721120
Molecular Weight (calculated)
23228.2 Da
IEP (calculated)
4.518
GRAVY (calculated)
-0.394
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: FQITVIIDVS VVLISQCRGA HSLTLCFDLN ITKYYNGCLF HKVKKDFLAQ SRDPSGTGSG GDSVYKFLYG DQARFFNDEI LPELRHSKTG TIGMASAGEN
101: CNASQFYITL RDDVEYLHDK HTVFGTVAEG LDTLTKINEA YVDDKGRPFK EIRIKHTYIL DDPFDDPPQF AELIPENSPL GKPRDEVVEE RLEDSWVPLD
201: ETVDPS
101: CNASQFYITL RDDVEYLHDK HTVFGTVAEG LDTLTKINEA YVDDKGRPFK EIRIKHTYIL DDPFDDPPQF AELIPENSPL GKPRDEVVEE RLEDSWVPLD
201: ETVDPS
001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR
Arabidopsis Description
CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.