Factsheet for Os06t0670500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0155600-01
Os01t0316600-01
Os03t0285900-01
Os03t0344100-02
Os03t0374575-01
Os04t0118900-01
Os05t0120100-01
Os05t0151000-00
Os05t0162600-01
Os05t0364600-01
Os07t0623300-01
Os07t0633200-02
Os07t0673500-01
Os09t0520700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53720.1	Os01t0316600-01	AT1G09140.1	16497658
AT1G53720.1	Os03t0344100-02	AT1G09140.1	16497658
AT1G53720.1	Os05t0364600-01	AT1G09140.1	16497658
AT1G53720.1	Os07t0673500-01	AT1G09140.1	16497658
AT1G53720.1	Os01t0155600-01	AT2G37340.1	16497658
AT1G53720.1	Os03t0285900-01	AT2G37340.1	16497658
AT1G53720.1	Os05t0120100-01	AT2G37340.1	16497658
AT1G53720.1	Os05t0162600-01	AT2G37340.1	16497658
AT1G53720.1	Os03t0374575-01	AT3G13570.1	16497658
AT1G53720.1	Os07t0633200-02	AT3G13570.1	16497658
AT1G53720.1	Os04t0118900-01	AT3G61860.1	16497658
AT1G53720.1	Os05t0151000-00	AT4G35800.1	16497658
AT1G53720.1	Os09t0520700-01	AT5G62190.1	16497658
AT1G53720.1	Os07t0623300-01	AT5G64200.2	16497658

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0670400-00	Rice	cytosol	71.99	86.57
Zm00001d036620_P001	Maize	nucleus	65.43	82.55
EER88795	Sorghum	cytosol	78.55	79.25
TraesCS7A01G469800.1	Wheat	nucleus	78.37	79.07
HORVU7Hr1G107520.5	Barley	nucleus	78.19	78.89
TraesCS7D01G457200.1	Wheat	nucleus	77.66	78.35
TraesCS7B01G371900.1	Wheat	nucleus	77.48	78.18
TraesCS3D01G065600.1	Wheat	cytosol	44.86	75.75
HORVU1Hr1G040970.1	Barley	cytosol, endoplasmic reticulum, mitochondrion	32.27	75.52
HORVU1Hr1G015670.5	Barley	cytosol	32.09	74.79
HORVU6Hr1G042040.1	Barley	endoplasmic reticulum	27.3	74.76
TraesCS4D01G241400.1	Wheat	nucleus	60.64	71.1
TraesCS4A01G064400.1	Wheat	nucleus	59.93	70.71
TraesCS3A01G064900.1	Wheat	cytosol	50.35	70.12
TraesCS4B01G241800.1	Wheat	nucleus	57.8	69.96
PGSC0003DMT400011164	Potato	cytosol	21.81	66.49
PGSC0003DMT400056014	Potato	cytosol	20.57	64.44
GSMUA_Achr10P...	Banana	cytosol	63.3	64.44
PGSC0003DMT400011166	Potato	nucleus	31.74	61.3
AT1G53720.1	Thale cress	nucleus	53.9	60.08
PGSC0003DMT400069100	Potato	cytosol	35.64	58.6
Bra030819.1-P	Field mustard	cytosol	52.84	54.78
Solyc07g066420.2.1	Tomato	nucleus	56.91	54.68
KRH13056	Soybean	nucleus	59.22	52.76
VIT_19s0027g01660.t01	Wine grape	nucleus	59.57	52.66
KRG93223	Soybean	nucleus	59.57	52.5
CDY72459	Canola	cytosol, extracellular, plastid	9.75	47.01
Os08t0559400-01	Rice	cytosol, nucleus	12.06	41.46
Os06t0130500-01	Rice	cytosol	11.52	40.62
CDY10512	Canola	nucleus	54.79	31.15
Os01t0582400-01	Rice	extracellular	19.15	21.64
Os07t0476500-01	Rice	mitochondrion	7.45	17.87
Os03t0201100-01	Rice	cytosol	0.71	2.68
Os08t0557500-01	Rice	cytosol	0.35	0.4

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	Gene3D:3.30.70.330	Gene3D:4.10.60.10	EntrezGene:4341804	EMBL:AK099323
ProteinID:BAD45991.1	ProteinID:BAF20243.1	ProteinID:BAS99071.1	ProteinID:BAS99072.1	InterPro:CRIP	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	InterPro:Cyclophilin_PPIL4	ProteinID:EEE66196.1	GO:GO:0000413	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	GO:GO:1901407	InterPro:IPR000504	InterPro:IPR001878	InterPro:IPR002130
InterPro:IPR012677	InterPro:IPR029000	InterPro:Nucleotide-bd_a/b_plait_sf	EnsemblPlantsGene:Os06g0670500	EnsemblPlants:Os06t0670500-01	PFAM:PF00076
PFAM:PF00098	PFAM:PF00160	PRINTS:PR00153	PFscan:PS50072	PFscan:PS50102	PFscan:PS50158
PANTHER:PTHR11071	PANTHER:PTHR11071:SF156	UniProt:Q653M6	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00343
SMART:SM00360	SUPFAM:SSF50891	SUPFAM:SSF54928	SUPFAM:SSF57756	UniParc:UPI000043A479	RefSeq:XP_015644543.1
InterPro:Znf_CCHC	InterPro:Znf_CCHC_sf	SEG:seg	:	:	:

Description

CYCLOPHILIN 59BSimilar to Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase. (Os06t0670500-01);Hypothetical conserved gene. (Os06t0670500-02)

Coordinates

chr6:+:27792515..27798510

Molecular Weight (calculated)

64978.7 Da

IEP (calculated)

5.771

GRAVY (calculated)

-1.208

Length

564 amino acids

Sequence
(BLAST)

001: MSVLIVTSVG DIEVDLHTDM CPLTTKNFLK LCKMKYYNGC LFHKVEKDFL AQTGDPTGTG AGGDSVYKFL YGDQARFFDD EIRPDLRHSK KGTIAMASAG
101: ENCNASQFYI TLRDDVDYLD DKHTVFGMVA EGFDTLTKIS ETYVDDKGRP FKDIRIKHTY VLDDPFDDPP QLSELIPENS PVGKPQDEIA EERLEDSWVP
201: MDEMVAPEEL EEMIRSKEAH TNAVILESVG DIPDAEIKPP DNVLFVCKLN PVTQDEDLYT IFSRFGTVTS AEIIRDYKTG DSLCYAFIEF ETKEACERAF
301: FKMDNCLIDD RRIHVDFSQS VSKLWGQFRQ SKRNANKDGC FKCGAPDHIA KDCDQGTEQK NKGPSYVLKD ENTQRGGNNR RSYDLVFDED GENYTDQQDP
401: GSTGRRKIQR TDDRKSGLPP RGDHDRISRE RTHSDENGRE GGKEGDRDRG IRKHEDYHRY NKSGERSSSR YDDRGYSKHE SRGKYRDGND DYRRQPGGGS
501: RYGRDKYEGE RRYREDDGHG RSDRHKRDES DNRKRSPDTG KHRREDGGHR ETSKHRERRQ RDDR

Best Arabidopsis Sequence Match ( AT1G53720.1 )
(BLAST)

001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR

Arabidopsis Description

CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.