CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92211
EER92984
EER94870
EER97062
EER97602
EES00292
EES08565
EES11769
EES13372
EES18924
KXG21152
KXG21387
KXG21391
KXG21829
KXG32406
KXG36736
KXG39239
OQU77498

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53720.1	EER94870	AT1G09140.1	16497658
AT1G53720.1	KXG21829	AT1G09140.1	16497658
AT1G53720.1	KXG32406	AT1G09140.1	16497658
AT1G53720.1	EES00292	AT2G37340.1	16497658
AT1G53720.1	EES18924	AT2G37340.1	16497658
AT1G53720.1	KXG21152	AT2G37340.1	16497658
AT1G53720.1	KXG21387	AT2G37340.1	16497658
AT1G53720.1	KXG21391	AT2G37340.1	16497658
AT1G53720.1	OQU77498	AT2G37340.1	16497658
AT1G53720.1	EER92211	AT3G13570.1	16497658
AT1G53720.1	EER97602	AT3G13570.1	16497658
AT1G53720.1	EER92984	AT3G61860.1	16497658
AT1G53720.1	EES11769	AT3G61860.1	16497658
AT1G53720.1	EES08565	AT4G35800.1	16497658
AT1G53720.1	EES13372	AT4G35800.1	16497658
AT1G53720.1	EER97062	AT5G62190.1	16497658
AT1G53720.1	KXG36736	AT5G64200.2	16497658
AT1G53720.1	KXG39239	AT5G64200.2	16497658

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036620_P001	Maize	nucleus	73.52	91.95
TraesCS7D01G457200.1	Wheat	nucleus	78.89	78.89
TraesCS7A01G469800.1	Wheat	nucleus	78.71	78.71
Os06t0670500-01	Rice	cytosol	79.25	78.55
HORVU7Hr1G107520.5	Barley	nucleus	78.0	78.0
TraesCS7B01G371900.1	Wheat	nucleus	77.82	77.82
HORVU1Hr1G040970.1	Barley	cytosol, endoplasmic reticulum, mitochondrion	33.45	77.59
HORVU6Hr1G042040.1	Barley	endoplasmic reticulum	28.44	77.18
HORVU1Hr1G015670.5	Barley	cytosol	33.27	76.86
TraesCS3D01G065600.1	Wheat	cytosol	45.62	76.35
Os06t0670400-00	Rice	cytosol	62.79	74.84
TraesCS4D01G241400.1	Wheat	nucleus	61.0	70.89
TraesCS4A01G064400.1	Wheat	nucleus	60.47	70.71
TraesCS3A01G064900.1	Wheat	cytosol	51.16	70.62
TraesCS4B01G241800.1	Wheat	nucleus	58.68	70.39
PGSC0003DMT400011164	Potato	cytosol	21.82	65.95
GSMUA_Achr10P...	Banana	cytosol	63.86	64.44
PGSC0003DMT400056014	Potato	cytosol	20.57	63.89
PGSC0003DMT400011166	Potato	nucleus	31.48	60.27
AT1G53720.1	Thale cress	nucleus	53.67	59.29
PGSC0003DMT400069100	Potato	cytosol	35.42	57.73
Bra030819.1-P	Field mustard	cytosol	53.13	54.6
Solyc07g066420.2.1	Tomato	nucleus	55.64	52.98
KRG93223	Soybean	nucleus	59.39	51.88
VIT_19s0027g01660.t01	Wine grape	nucleus	59.03	51.72
KRH13056	Soybean	nucleus	58.32	51.5
CDY72459	Canola	cytosol, extracellular, plastid	9.66	46.15
EER87777	Sorghum	cytosol	11.45	40.0
EES14084	Sorghum	cytosol	11.63	39.63
CDY10512	Canola	nucleus	55.28	31.15
EES03161	Sorghum	nucleus	19.86	21.64
KXG36207	Sorghum	mitochondrion	6.8	16.31
EER92686	Sorghum	cytosol	13.77	13.03
OQU80719	Sorghum	cytosol	11.99	10.36

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	Gene3D:3.30.70.330	Gene3D:4.10.60.10	EntrezGene:8061594	UniProt:C5Z7R2
InterPro:CRIP	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	InterPro:Cyclophilin_PPIL4	EnsemblPlants:EER88795
ProteinID:EER88795	ProteinID:EER88795.1	GO:GO:0000413	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006457	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	GO:GO:1901407	InterPro:IPR000504	InterPro:IPR001878	InterPro:IPR002130	InterPro:IPR012677
InterPro:IPR029000	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFAM:PF00098	PFAM:PF00160	PRINTS:PR00153
PFscan:PS50072	PFscan:PS50102	PFscan:PS50158	PANTHER:PTHR11071	PANTHER:PTHR11071:SF156	InterPro:RBD_domain_sf
InterPro:RRM_dom	SMART:SM00343	SMART:SM00360	EnsemblPlantsGene:SORBI_3010G224300	SUPFAM:SSF50891	SUPFAM:SSF54928
SUPFAM:SSF57756	unigene:Sbi.6366	UniParc:UPI0001A88F49	RefSeq:XP_002437428.1	InterPro:Znf_CCHC	InterPro:Znf_CCHC_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:56603672..56609258

Molecular Weight (calculated)

64971.5 Da

IEP (calculated)

6.244

GRAVY (calculated)

-1.261

Length

559 amino acids

Sequence
(BLAST)

001: MSVLIVTSVG DIEVDLHTDR CPLTTKNFLK LCKMKYYNGC LFHKVEKDFL AQTGDPTGTG TAGDSVYKYL YGDQARFFDD EIRPELRHSK TGTVAMASAG
101: ENCNASQFYI TLRDDVDYLD DKHTVFGMVA EGFDTLTKIN EAYVDDKGRP FKDIRIKHTY VLDDPFDDPP QLAELIPENS PTGKPRDEVA EERLEDTWVP
201: LDQTVDPEQL EEMIRSKEAH TNAVILESLA DIPDAEIKPP ENVLFVCKLN PVTQDEDLYT IFSRFGTVTS AEIIRDYKTG DSLCYAFIEF DTKEACERAY
301: FKMDNCLIDD RRIHVDFSQS VSKLWGQFRQ SKRNAKKDGC FKCGAPDHLA RDCDQDGEQK NKGPNYVLKD ENTQRGGNHR RSYDLVFDED EDEADYSDKR
401: DHENGHRRKN RRIDDQKSEL PPRGDRERNS HERTRSDEKG SRHGKDDRNQ GGRKHDGYHS YSRSSDRSSG RYDDRDYSKH SNRSRSGEVE EGRRSDKSDG
501: ERRHRDDAYE KSEHHRRDEI SHRKRSPDSR HRREDRAHHV KKQQSDDRSY KERRHRDGR

Best Arabidopsis Sequence Match ( AT1G53720.1 )
(BLAST)

001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR

Arabidopsis Description

CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.