CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049958_P002	Maize	cytosol	96.45	93.0
TraesCS7D01G277600.1	Wheat	nucleus	91.34	91.2
TraesCS7A01G277700.1	Wheat	cytosol	91.34	91.2
TraesCS7B01G175400.1	Wheat	cytosol	91.19	91.05
HORVU7Hr1G058730.3	Barley	cytosol, mitochondrion, nucleus	91.04	87.0
GSMUA_Achr1P17040_001	Banana	cytosol	82.23	84.98
KRH22711	Soybean	nucleus	80.22	84.25
KRH26593	Soybean	nucleus	79.6	83.6
Solyc11g067090.1.1	Tomato	cytosol, nucleus	78.98	82.15
PGSC0003DMT400019171	Potato	cytosol	78.52	81.8
CDY08708	Canola	cytosol	76.82	79.9
Bra019430.1-P	Field mustard	cytosol	76.82	79.9
CDX99192	Canola	cytosol	76.66	79.74
VIT_06s0061g01590.t01	Wine grape	cytosol	72.64	79.12
AT3G44600.1	Thale cress	cytosol	76.04	77.97
EES14084	Sorghum	cytosol	12.98	51.22
EER87777	Sorghum	cytosol	11.9	48.12
KXG36207	Sorghum	mitochondrion	9.89	27.47
EER92686	Sorghum	cytosol	22.1	24.2
EES03161	Sorghum	nucleus	11.9	15.01
EER88795	Sorghum	cytosol	10.36	11.99

Protein Annotations

MapMan:18.12.1	Gene3D:2.130.10.10	Gene3D:2.40.100.10	EntrezGene:8057995	UniProt:C5YN92	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	ProteinID:EES15191.1	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR001680
InterPro:IPR002130	InterPro:IPR015943	InterPro:IPR017986	InterPro:IPR029000	EnsemblPlants:OQU80719	ProteinID:OQU80719
ProteinID:OQU80719.1	PFAM:PF00160	PFAM:PF00400	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR11071	PANTHER:PTHR11071:SF213	SMART:SM00320	EnsemblPlantsGene:SORBI_3007G171100
SUPFAM:SSF50891	SUPFAM:SSF50978	UniParc:UPI0001A87DDA	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	RefSeq:XP_002445696.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:60657008..60662992

Molecular Weight (calculated)

72687.5 Da

IEP (calculated)

6.940

GRAVY (calculated)

-0.452

Length

647 amino acids

Sequence
(BLAST)

001: MASASETTEQ STITSTTMDD GGAHESKREH LNGAAATPTV GQEEDEMIGP GPAPAKQRQK RPLQFEQAFL DALPSAAMYE KSYMHRDVVT HVAVSPADFF
101: ITGSADGHLK FWKKKPVGIE FAKHFRSHLS PIEGLAVSVD GLLCCTISND RSVKIYDVVN YDMMFMMRLS FVPGAIEWVH REGDVKPKLA VSDRNTPLVH
201: IFDTHSGSND PIMSKEIHGG PVKVMKYNHI HDVVISADAK GLLEYWSPST LKFPENEVRF RLKSDTNLFE IAKCKTSVSA IEVSNDGTQF AVTSPDRRIR
301: VFWFKTGKLR RVYDESLEVA QDLQRSDVPL YHLDAIDFGR RMAVEKEIEK TENVPQPNAV FDESSNFLIY ATLLGVKIVN LHTNKVSRIL GKVENNERFL
401: RIALYQGDKG NKKVRKIPSV AANVNDSKEP LSDPTLLCCA FKKHRIYLFS RREPEEPEDA TKGRDVFNEK PPPEELLSVS DLGKTATTSL PDNLVLHTSM
501: GDIHLRLYPE ECPKTVENFT THCRNGYYDN LIFHRVIKGF MIQTGDPLGD GTGGQSIWGT EFEDEFHKSL RHDRPFTLSM ANAGPNTNGS QFFITTVATP
601: WLDNKHTVFG RVVKGMDVVQ QIEKVKTDKN DKPYQDVKIL NVTVPKT

Best Arabidopsis Sequence Match ( AT3G44600.1 )
(BLAST)

001: MEEESKNGGT TIPTEELAVV AVPPVVEEEE PMVGPGPAPR GKRKRPLQFE QAYLDSLPSA NMYEKSYMHR DVVTHVAVSA AEFFISGSMD GHLKFWKKKG
101: VGIEFAKHFR SHLGPIEGLA VSIDGLLCCT ISNDHAVKIY DVVNYDMMAM IRLPYIPGAV EWVYKQGDVK AKLAVSDRDS LFVHIYDPRS GSNEPIASKE
201: IHMNPIKVMK YNPVSDTMIS GDTKGIIEYW SATTLQFPED EVNFKLKSDT NLFEIIKCKT TISAIEVSPD GKQFSITAPD RRIRVFWFRT GKLRRVYDES
301: LVVAQDLQRS DAPLYRLEAI DFGRRMAVEK ELEKTESAPQ PNAVFDESSN FLIYATFLGI KVINLHTNTV ARILGKVESN ERYLRVALYQ GDQGGKKVRK
401: IPAAAANVNE SKEPLTDPTI LCCAFKKHRI YMFSRREPEE PEDASQGRDV FNEKPAADEL MSVSDIGNSA TTSLPENVIM HTTLGDIHMK LYPEECPKTV
501: ENFTTHCRNG YYDNHLFHRV IRGFMIQTGD PLGDGTGGQS IWGREFEDEF HKSLRHDRPF TLSMANAGPN TNGSQFFITT VATPWLDNKH TVFGRVVKGM
601: DVVQGIEKVK TDKNDRPYQD VKILNVTVPK S

Arabidopsis Description

CYP71Peptidyl-prolyl cis-trans isomerase CYP71 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4D0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.