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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g067090.1.1 Tomato cytosol, nucleus 98.55 98.39
KRH22711 Soybean nucleus 87.12 87.82
KRH26593 Soybean nucleus 86.96 87.66
Bra019430.1-P Field mustard cytosol 82.93 82.8
GSMUA_Achr1P17040_001 Banana cytosol 83.41 82.75
VIT_06s0061g01590.t01 Wine grape cytosol 79.07 82.66
CDX99192 Canola cytosol 82.77 82.64
CDY08708 Canola cytosol 82.61 82.48
AT3G44600.1 Thale cress cytosol 83.41 82.09
TraesCS7A01G277700.1 Wheat cytosol 82.45 79.01
TraesCS7D01G277600.1 Wheat nucleus 82.29 78.86
TraesCS7B01G175400.1 Wheat cytosol 82.29 78.86
OQU80719 Sorghum cytosol 81.8 78.52
HORVU7Hr1G058730.3 Barley cytosol, mitochondrion, nucleus 82.13 75.33
Zm00001d049958_P002 Maize cytosol 80.84 74.81
PGSC0003DMT400022853 Potato cytosol 13.04 49.39
PGSC0003DMT400038471 Potato cytosol 12.08 46.88
PGSC0003DMT400072698 Potato mitochondrion, plastid 11.11 30.0
PGSC0003DMT400009946 Potato mitochondrion 10.79 28.39
PGSC0003DMT400056014 Potato cytosol 7.41 25.56
PGSC0003DMT400055240 Potato cytosol 21.74 22.65
PGSC0003DMT400069100 Potato cytosol 7.57 13.7
PGSC0003DMT400011164 Potato cytosol 3.06 10.27
PGSC0003DMT400011166 Potato nucleus 4.03 8.56
PGSC0003DMT400043897 Potato cytoskeleton, cytosol, nucleus 0.81 2.59
Protein Annotations
EntrezGene:102599272MapMan:18.12.1Gene3D:2.130.10.10Gene3D:2.40.100.10InterPro:Cyclophilin-like_dom_sfInterPro:Cyclophilin-type_PPIase
InterPro:Cyclophilin-type_PPIase_CSInterPro:Cyclophilin-type_PPIase_domGO:GO:0000003GO:GO:0000413GO:GO:0003674GO:GO:0003682
GO:GO:0003755GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006457GO:GO:0006464GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0009653GO:GO:0009791GO:GO:0009908GO:GO:0009909GO:GO:0009933
GO:GO:0009987GO:GO:0010082GO:GO:0010305GO:GO:0010338GO:GO:0010358GO:GO:0016043
GO:GO:0016853GO:GO:0019538GO:GO:0031060GO:GO:0040007GO:GO:0042393GO:GO:0048440
GO:GO:0048443GO:GO:0048453InterPro:IPR001680InterPro:IPR002130InterPro:IPR015943InterPro:IPR017986
InterPro:IPR029000UniProt:M1ABP7PFAM:PF00160PFAM:PF00400EnsemblPlantsGene:PGSC0003DMG400007418PGSC:PGSC0003DMG400007418
EnsemblPlants:PGSC0003DMT400019171PRINTS:PR00153ScanProsite:PS00170PFscan:PS50072PFscan:PS50294PANTHER:PTHR11071
PANTHER:PTHR11071:SF213SMART:SM00320SUPFAM:SSF50891SUPFAM:SSF50978UniParc:UPI000295D8A7InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeatInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfRefSeq:XP_006349106.1SEG:seg:
Description
WD-repeat protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007418]
Coordinates
chr11:+:39947475..39956055
Molecular Weight (calculated)
69978.6 Da
IEP (calculated)
7.082
GRAVY (calculated)
-0.378
Length
621 amino acids
Sequence
(BLAST)
001: MEEADQNENG NPAAAVEETE TVIGPGPAPR ARAKRPLQFE QAYLDSLPSA NLYEKSYMHR DVVTHVAVSA ADFFISGSTD GHLKFWKKKP IGIEFAKHFR
101: SHLGPIEGLA VSIDGMLCCT ISSDKSLKIY DVVNYDMMSM IRLPFIPGCV EWVYKQGAVK AKLAVSDRNS SLVHIYDARA GTNDPIISKE VQLCPIKVMK
201: YNHVFDTVIS ADDKGIIEYW SPATLQFPEN VVNFRLKSDT DLFEIVKCKT AVSSIEVSPD GKQFSVTSPD RRIRIFWFKT GKLRRVYDES LEVAQDLQRS
301: DVPLYRLEAI DFGRRMAVEK EIEKTEYVPQ PNAVFDESSN FIIYATLLGI KVINLHTNKV SRILGKVESN DRFLRIALYQ GDRSSKKVRK IPAAAANANE
401: SKEPLIDPTL LCCAFKKHRI YLFSQREPEE PDDPTKGRDV FNEKPPPDEL LAVSDIGKSV TTSLPDNVIM HTSMGDIHMK LYPEECPKTV ENFTTHCRNG
501: YYDNLIFHRV IRGFMVQTGD PLGDGTGGQS IWGREFEDEF HKSLRHDRPF TFSMANAGPN TNGSQFFITT VATPWLDNKH TVFGRVVKGM DVVQSLEKVK
601: TDKGDKPYQD VKILNVTVPK S
Best Arabidopsis Sequence Match ( AT3G44600.1 )
(BLAST)
001: MEEESKNGGT TIPTEELAVV AVPPVVEEEE PMVGPGPAPR GKRKRPLQFE QAYLDSLPSA NMYEKSYMHR DVVTHVAVSA AEFFISGSMD GHLKFWKKKG
101: VGIEFAKHFR SHLGPIEGLA VSIDGLLCCT ISNDHAVKIY DVVNYDMMAM IRLPYIPGAV EWVYKQGDVK AKLAVSDRDS LFVHIYDPRS GSNEPIASKE
201: IHMNPIKVMK YNPVSDTMIS GDTKGIIEYW SATTLQFPED EVNFKLKSDT NLFEIIKCKT TISAIEVSPD GKQFSITAPD RRIRVFWFRT GKLRRVYDES
301: LVVAQDLQRS DAPLYRLEAI DFGRRMAVEK ELEKTESAPQ PNAVFDESSN FLIYATFLGI KVINLHTNTV ARILGKVESN ERYLRVALYQ GDQGGKKVRK
401: IPAAAANVNE SKEPLTDPTI LCCAFKKHRI YMFSRREPEE PEDASQGRDV FNEKPAADEL MSVSDIGNSA TTSLPENVIM HTTLGDIHMK LYPEECPKTV
501: ENFTTHCRNG YYDNHLFHRV IRGFMIQTGD PLGDGTGGQS IWGREFEDEF HKSLRHDRPF TLSMANAGPN TNGSQFFITT VATPWLDNKH TVFGRVVKGM
601: DVVQGIEKVK TDKNDRPYQD VKILNVTVPK S
Arabidopsis Description
CYP71Peptidyl-prolyl cis-trans isomerase CYP71 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4D0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.