Factsheet for HORVU7Hr1G058730.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G277600.1	Wheat	nucleus	95.13	99.38
TraesCS7A01G277700.1	Wheat	cytosol	94.68	98.92
TraesCS7B01G175400.1	Wheat	cytosol	94.39	98.61
OQU80719	Sorghum	cytosol	87.0	91.04
Zm00001d049958_P002	Maize	cytosol	86.12	86.89
KRH22711	Soybean	nucleus	76.37	83.93
GSMUA_Achr1P17040_001	Banana	cytosol	77.25	83.55
KRH26593	Soybean	nucleus	75.63	83.12
PGSC0003DMT400019171	Potato	cytosol	75.33	82.13
Solyc11g067090.1.1	Tomato	cytosol, nucleus	75.33	81.99
Bra019430.1-P	Field mustard	cytosol	73.41	79.9
CDY08708	Canola	cytosol	73.41	79.9
CDX99192	Canola	cytosol	73.26	79.74
VIT_06s0061g01590.t01	Wine grape	cytosol	69.13	78.79
AT3G44600.1	Thale cress	cytosol	72.82	78.13
HORVU7Hr1G059320.3	Barley	plastid	12.26	41.29
HORVU6Hr1G042040.1	Barley	endoplasmic reticulum	7.83	25.73
HORVU4Hr1G070330.9	Barley	cytosol	21.27	24.41
HORVU1Hr1G040970.1	Barley	cytosol, endoplasmic reticulum, mitochondrion	7.98	22.41
HORVU1Hr1G015670.5	Barley	cytosol	7.83	21.9
HORVU2Hr1G054470.1	Barley	plastid	7.83	20.78
HORVU3Hr1G050400.5	Barley	cytosol, nucleus	10.78	18.67
HORVU7Hr1G107520.5	Barley	nucleus	9.75	11.81

Protein Annotations

MapMan:18.12.1	Gene3D:2.130.10.10	Gene3D:2.40.100.10	UniProt:A0A287WMQ3	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase
InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G058730	EnsemblPlants:HORVU7Hr1G058730.3	InterPro:IPR001680
InterPro:IPR002130	InterPro:IPR015943	InterPro:IPR017986	InterPro:IPR029000	PFAM:PF00160	PFAM:PF00400
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR11071
PANTHER:PTHR11071:SF213	SMART:SM00320	SUPFAM:SSF50891	SUPFAM:SSF50978	UniParc:UPI000B48068B	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:-:260598584..260607581

Molecular Weight (calculated)

75997.3 Da

IEP (calculated)

6.958

GRAVY (calculated)

-0.468

Length

677 amino acids

Sequence
(BLAST)

001: TGPNKPRSIS PYLLPQIPGT LVKRRLEFDM ATTSESTANS TVTSATADGD TEREQEHGNG ATAAPAVVQQ EEEGEELIGP GPAPARQRQK RPLQFEQAFL
101: DALPSAAMYE KSYMHRDVVT HVAVSPADFF ITGSADGHLK FWKKKPSGIE FAKHFRSHLS PIEGLAVSVD GLLCCTISND QSVKIYDVVN YDMMFMMRLP
201: FVPGAIEWVY RQGDVKPKLA VSDRNTSSVH IYDTHSGSND PIISKEIHAG PVKVMKYNHA QDVVISADAK GLLEYWSPST LKFPEDAVNF RLKTDTNLFE
301: LAKCKTSVSA IEVSNDGTQF VVTSPDRRIR VFWFKTGKLR RVYDESLEVA QDLQKSDVPL YHLDAIDFGR RMAVEKEIEK TENVPQPNAV FDESCNFLIY
401: ATLLGIKVVN LHTNKVPRIL GKVENNERFL RIALYQGDKG NKKVRKIPSI AANVNDTKEP LSDPTLLCCA FKKHRIYTFS RREPEEPEDA TKGRDVFNEK
501: PPPEELLSLS ELGKTATTSL PDNLVFHTSM GDIHLRLYPE ECPKTVENFT THCRNGYYDN LIFHRVIKGF MVQTGDPLGD GTGGQSIWGR EFEDEFHKSL
601: RHDRPFTLSM ANAGPNTNGS QFFITTVATP WLDNKHTVFG RVVKGMDVVQ QIEKVKTDKN DKPYQDVKIL NVTVPRT

Best Arabidopsis Sequence Match ( AT1G01940.1 )
(BLAST)

001: MSVTLHTNLG DIKCEIFCDE VPKSAENFLA LCASGYYDGT IFHRNIKGFM IQGGDPKGTG KGGTSIWGKK FNDEIRDSLK HNARGMLSMA NSGPNTNGSQ
101: FFITYAKQPH LNGLYTIFGK VIHGFEVLDI MEKTQTGPGD RPLAEIRLNR VTIHANPLAG

Arabidopsis Description

CYP18-1Peptidyl-prolyl cis-trans isomerase CYP18-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.