Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G209000.1 | Wheat | nucleus | 97.4 | 98.38 |
| TraesCS3D01G211900.1 | Wheat | nucleus | 97.6 | 97.8 |
| HORVU3Hr1G050400.5 | Barley | cytosol, nucleus | 66.6 | 85.17 |
| Os01t0582400-01 | Rice | extracellular | 84.2 | 84.37 |
| EES03161 | Sorghum | nucleus | 79.6 | 77.58 |
| Zm00001d044297_P002 | Maize | nucleus | 79.0 | 72.08 |
| VIT_04s0008g01370.t01 | Wine grape | cytosol | 61.6 | 61.85 |
| CDX68936 | Canola | nucleus | 56.8 | 60.81 |
| Solyc08g062700.2.1 | Tomato | nucleus | 59.6 | 60.57 |
| KRH05304 | Soybean | nucleus | 59.6 | 60.45 |
| CDX75321 | Canola | nucleus | 58.2 | 59.15 |
| GSMUA_Achr8P05680_001 | Banana | endoplasmic reticulum | 66.8 | 59.12 |
| Bra011410.1-P | Field mustard | nucleus | 58.4 | 59.11 |
| AT4G33060.1 | Thale cress | nucleus | 57.4 | 56.94 |
| TraesCS7B01G180900.1 | Wheat | cytosol | 15.6 | 47.56 |
| TraesCS4B01G241800.1 | Wheat | nucleus | 19.8 | 21.24 |
| TraesCS7B01G371900.1 | Wheat | nucleus | 21.6 | 19.32 |
| TraesCS2B01G255000.1 | Wheat | mitochondrion | 8.2 | 17.6 |
| TraesCS4B01G260100.1 | Wheat | cytosol | 19.2 | 16.27 |
| TraesCS7B01G175400.1 | Wheat | cytosol | 15.0 | 11.57 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006457 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0019538 |
| InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 |
| PANTHER:PTHR11071 | PANTHER:PTHR11071:SF152 | SUPFAM:SSF50891 | EnsemblPlantsGene:TraesCS3B01G239300 | EnsemblPlants:TraesCS3B01G239300.1 | TIGR:cd01925 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:377427243..377432616
Molecular Weight (calculated)
57033.7 Da
IEP (calculated)
5.763
GRAVY (calculated)
-1.033
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVYVLEPP TKGKVVVQTT AGPIDIELWA KEAPKATRNF VQLCLEGYYD GTLFHRVIKS FLIQGGDPTG SGTGGESIYG APFADEFHSR LRFNHRGLLA
101: CANAGTPHSN GSQFFITLDR CDWLDKKNTI FGKVTGDSIF NLLALADIET DKDDRPVYPQ KILSVEVLWN PFDDIVPRQL KKIEPAPKAD AERKPEKKAV
201: KQLNVLSFGD EVEEEENEAA SFVKDKIKSI HDVLDDPRFL KVEPQVEQLS KEEEEKKNET VLSIREALIS KKADSREPEH DPENDDSPED ENEEDFDNRM
301: RSRILKKRRE LGDIQQSQSS KKDKSHQKDK ELPAHRSDDN DDDDDEDDDD HQLSKSRKLS LKKKGIGSEA NTERMSRGDV NLQLLNPAEQ EKHLKKQRKR
401: SLQGREEETL AKLQKFKASL MSNKPANMEK KAESSEDYKE WHANRLTFAP ESSKDGMTRK DDPNDYVVVD PLLEKGKQKF NKMQAKLKKR DREWAGRSLT
101: CANAGTPHSN GSQFFITLDR CDWLDKKNTI FGKVTGDSIF NLLALADIET DKDDRPVYPQ KILSVEVLWN PFDDIVPRQL KKIEPAPKAD AERKPEKKAV
201: KQLNVLSFGD EVEEEENEAA SFVKDKIKSI HDVLDDPRFL KVEPQVEQLS KEEEEKKNET VLSIREALIS KKADSREPEH DPENDDSPED ENEEDFDNRM
301: RSRILKKRRE LGDIQQSQSS KKDKSHQKDK ELPAHRSDDN DDDDDEDDDD HQLSKSRKLS LKKKGIGSEA NTERMSRGDV NLQLLNPAEQ EKHLKKQRKR
401: SLQGREEETL AKLQKFKASL MSNKPANMEK KAESSEDYKE WHANRLTFAP ESSKDGMTRK DDPNDYVVVD PLLEKGKQKF NKMQAKLKKR DREWAGRSLT
001: MSTVYVLEPP TKGKVIVNTT HGPIDVELWP KEAPKSVRNF VQLCLEGYFD NTIFHRVIPG FLVQGGDPTG SGTGGDSIYG GVFADEFHSR LRFSHRGIVA
101: MANASSPNSN GSQFFFTLDK CDWLDKKHTI FGKVTGDSIY NLLRLGEVDT SKDDRPLDPA PKILSVEVLW NPFEDIVPRV LAKTSEESAA EIKEPPTKPV
201: KKLNLLSFGE EAEEEEKELA VVKQKIKSSH DVLNDPRLLK AEASDKERNA SESKEVLSVR EALNAKKEAA QKDKSFSVSD TVGNSDDDDD GEDETKFDAK
301: MRNQVLSRRK EIGDTPSKPT QKKKSSSLKG REESTQRSDA VSSEDEKPRM EKLSLKKKGI GSEAKAEHME KGDTDLQLYN ASERARQLHK LKKRRLQGNE
401: DSVLAKLEKF KQSISAKPFT SSNEPVVLTS SSEPVDNKEE DLSDWKNVKL KFAPERGKDK MSRRDDPDAY MVVDPLLEKG KEKFNRMQAK QKRREREWSG
501: KSLA
101: MANASSPNSN GSQFFFTLDK CDWLDKKHTI FGKVTGDSIY NLLRLGEVDT SKDDRPLDPA PKILSVEVLW NPFEDIVPRV LAKTSEESAA EIKEPPTKPV
201: KKLNLLSFGE EAEEEEKELA VVKQKIKSSH DVLNDPRLLK AEASDKERNA SESKEVLSVR EALNAKKEAA QKDKSFSVSD TVGNSDDDDD GEDETKFDAK
301: MRNQVLSRRK EIGDTPSKPT QKKKSSSLKG REESTQRSDA VSSEDEKPRM EKLSLKKKGI GSEAKAEHME KGDTDLQLYN ASERARQLHK LKKRRLQGNE
401: DSVLAKLEKF KQSISAKPFT SSNEPVVLTS SSEPVDNKEE DLSDWKNVKL KFAPERGKDK MSRRDDPDAY MVVDPLLEKG KEKFNRMQAK QKRREREWSG
501: KSLA
Arabidopsis Description
CYP57Peptidyl-prolyl cis-trans isomerase CYP57 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q152]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.