Factsheet for Zm00001d036035_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87777	Sorghum	cytosol	96.25	96.25
Os06t0130500-01	Rice	cytosol	94.38	94.38
TraesCS7A01G066500.1	Wheat	cytosol	90.62	90.62
TraesCS4A01G423000.1	Wheat	cytosol	90.62	90.62
TraesCS7D01G060700.1	Wheat	cytosol	90.0	90.0
VIT_15s0048g01780.t01	Wine grape	cytosol	87.5	87.5
Solyc08g006090.2.1	Tomato	cytosol, nucleus	87.5	87.5
Bra032657.1-P	Field mustard	cytosol	86.88	86.88
PGSC0003DMT400038471	Potato	cytosol	86.88	86.88
AT1G01940.1	Thale cress	cytosol	86.88	86.88
KRH76297	Soybean	cytosol	88.12	85.45
CDY38037	Canola	mitochondrion, plastid	86.25	71.5
Zm00001d031937_P001	Maize	cytosol	40.0	36.78
Zm00001d021332_P002	Maize	mitochondrion	30.0	20.6
Zm00001d036620_P001	Maize	nucleus	40.0	14.32
Zm00001d028109_P006	Maize	cytosol	55.0	13.23
Zm00001d044297_P002	Maize	nucleus	43.75	12.77
Zm00001d049958_P002	Maize	cytosol	45.62	10.88

Protein Annotations

EntrezGene:100381373	MapMan:18.12.1	Gene3D:2.40.100.10	ProteinID:AQK80196.1	UniProt:B6TYW9	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	EMBL:EU970184	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160
PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF147
SUPFAM:SSF50891	UniParc:UPI000182FA66	EnsemblPlantsGene:Zm00001d036035	EnsemblPlants:Zm00001d036035_P001	EnsemblPlants:Zm00001d036035_T001	SEG:seg

Description

Putative peptidyl-prolyl cis-trans isomerase family protein

Coordinates

chr6:+:67523590..67524538

Molecular Weight (calculated)

17397.8 Da

IEP (calculated)

8.110

GRAVY (calculated)

-0.239

Length

160 amino acids

Sequence
(BLAST)

001: MSVTLHTNLG DIKCEVFCDQ VPRTAENFLA LCGSGYYDGT VFHRNIKGFM VQGGDPTGTG KGGSSIWGAK FADELRESLK HNARGIMSMA NSGPNTNGSQ
101: FFITYAKQPH LNGHYTVFAK VIHGFEVLDL MEKAQTGPGD RPLAEIRLNR VTIHANPLAV

Best Arabidopsis Sequence Match ( AT1G01940.1 )
(BLAST)

001: MSVTLHTNLG DIKCEIFCDE VPKSAENFLA LCASGYYDGT IFHRNIKGFM IQGGDPKGTG KGGTSIWGKK FNDEIRDSLK HNARGMLSMA NSGPNTNGSQ
101: FFITYAKQPH LNGLYTIFGK VIHGFEVLDI MEKTQTGPGD RPLAEIRLNR VTIHANPLAG

Arabidopsis Description

CYP18-1Peptidyl-prolyl cis-trans isomerase CYP18-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.