Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032657.1-P | Field mustard | cytosol | 95.62 | 95.62 |
| AT1G01940.1 | Thale cress | cytosol | 94.38 | 94.38 |
| KRH76297 | Soybean | cytosol | 95.62 | 92.73 |
| Solyc08g006090.2.1 | Tomato | cytosol, nucleus | 91.88 | 91.88 |
| PGSC0003DMT400038471 | Potato | cytosol | 91.25 | 91.25 |
| EER87777 | Sorghum | cytosol | 89.38 | 89.38 |
| Os06t0130500-01 | Rice | cytosol | 89.38 | 89.38 |
| Zm00001d036035_P001 | Maize | cytosol | 87.5 | 87.5 |
| TraesCS7A01G066500.1 | Wheat | cytosol | 85.62 | 85.62 |
| TraesCS4A01G423000.1 | Wheat | cytosol | 85.0 | 85.0 |
| TraesCS7D01G060700.1 | Wheat | cytosol | 85.0 | 85.0 |
| CDY38037 | Canola | mitochondrion, plastid | 95.0 | 78.76 |
| VIT_08s0007g02900.t01 | Wine grape | cytosol | 48.12 | 46.39 |
| VIT_00s0513g00020.t01 | Wine grape | cytosol | 51.88 | 25.08 |
| VIT_05s0077g01040.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 32.5 | 18.37 |
| VIT_07s0129g00040.t01 | Wine grape | cytosol | 56.25 | 15.08 |
| VIT_04s0008g01370.t01 | Wine grape | cytosol | 43.12 | 13.86 |
| VIT_06s0061g01590.t01 | Wine grape | cytosol | 50.62 | 13.64 |
| VIT_19s0027g01660.t01 | Wine grape | nucleus | 43.12 | 10.81 |
Protein Annotations
| EntrezGene:100247290 | wikigene:100247290 | MapMan:18.12.1 | Gene3D:2.40.100.10 | ProteinID:CCB61343 | ProteinID:CCB61343.1 |
| InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | UniProt:F6I326 | EMBL:FN596739 |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR002130 |
| InterPro:IPR029000 | EntrezGene:LOC100247290 | wikigene:LOC100247290 | PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 |
| ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF147 | SUPFAM:SSF50891 | UniParc:UPI0001984EAE |
| ArrayExpress:VIT_15s0048g01780 | EnsemblPlantsGene:VIT_15s0048g01780 | EnsemblPlants:VIT_15s0048g01780.t01 | RefSeq:XP_002274583 | RefSeq:XP_002274583.1 | SEG:seg |
Description
Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:F6I326]
Coordinates
chr15:+:15962121..15964892
Molecular Weight (calculated)
17404.8 Da
IEP (calculated)
8.098
GRAVY (calculated)
-0.278
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVTLHTNLG DIKCEISCDE VSKTAENFLA LCASGYYDGT IFHRNIKGFM IQGGDPTGTG KGGTSIWGKK FNDEIRESLK HNARGILSMA NSGPNTNGSQ
101: FFITYAKQPH LNGLYTVFGR VIHGFEVLDI MEKTQTGAGD RPLAEIRLNR VTIHANPLAG
101: FFITYAKQPH LNGLYTVFGR VIHGFEVLDI MEKTQTGAGD RPLAEIRLNR VTIHANPLAG
001: MSVTLHTNLG DIKCEIFCDE VPKSAENFLA LCASGYYDGT IFHRNIKGFM IQGGDPKGTG KGGTSIWGKK FNDEIRDSLK HNARGMLSMA NSGPNTNGSQ
101: FFITYAKQPH LNGLYTIFGK VIHGFEVLDI MEKTQTGPGD RPLAEIRLNR VTIHANPLAG
101: FFITYAKQPH LNGLYTIFGK VIHGFEVLDI MEKTQTGPGD RPLAEIRLNR VTIHANPLAG
Arabidopsis Description
CYP18-1Peptidyl-prolyl cis-trans isomerase CYP18-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.