Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G060700.1 | Wheat | cytosol | 99.38 | 99.38 |
| TraesCS4A01G423000.1 | Wheat | cytosol | 98.75 | 98.75 |
| EER87777 | Sorghum | cytosol | 91.25 | 91.25 |
| Zm00001d036035_P001 | Maize | cytosol | 90.62 | 90.62 |
| Os06t0130500-01 | Rice | cytosol | 90.0 | 90.0 |
| Solyc08g006090.2.1 | Tomato | cytosol, nucleus | 86.25 | 86.25 |
| VIT_15s0048g01780.t01 | Wine grape | cytosol | 85.62 | 85.62 |
| PGSC0003DMT400038471 | Potato | cytosol | 85.62 | 85.62 |
| Bra032657.1-P | Field mustard | cytosol | 85.0 | 85.0 |
| AT1G01940.1 | Thale cress | cytosol | 85.0 | 85.0 |
| KRH76297 | Soybean | cytosol | 85.62 | 83.03 |
| CDY38037 | Canola | mitochondrion, plastid | 84.38 | 69.95 |
| TraesCS7A01G279300.1 | Wheat | cytosol, nucleus | 48.12 | 46.95 |
| TraesCS4A01G045200.1 | Wheat | cytosol | 58.12 | 15.76 |
| TraesCS3A01G064900.1 | Wheat | cytosol | 39.38 | 15.56 |
| TraesCS3A01G209000.1 | Wheat | nucleus | 45.0 | 14.55 |
| TraesCS4A01G064400.1 | Wheat | nucleus | 42.5 | 14.23 |
| TraesCS7A01G469800.1 | Wheat | nucleus | 41.88 | 11.99 |
| TraesCS7A01G277700.1 | Wheat | cytosol | 48.12 | 11.88 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 |
| PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF147 | SUPFAM:SSF50891 | EnsemblPlantsGene:TraesCS7A01G066500 | EnsemblPlants:TraesCS7A01G066500.1 | TIGR:cd01928 | SEG:seg |
Description
No Description!
Coordinates
chr7A:+:33368439..33369029
Molecular Weight (calculated)
17255.5 Da
IEP (calculated)
8.266
GRAVY (calculated)
-0.261
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVTLHTNLG DIKVEVHCDQ VPRTAENFLA LCASGYYDGT VFHRNIKGFM VQGGDPTGTG KGGASIWGGK FADEFREALK HGARGTLSMA NSGPNTNGSQ
101: FFITYAKQPH LNGHYTVFAK VIHGFEVLDL MEKTPTGPAD RPLAEIRLNR VTVHANPLAG
101: FFITYAKQPH LNGHYTVFAK VIHGFEVLDL MEKTPTGPAD RPLAEIRLNR VTVHANPLAG
001: MSVTLHTNLG DIKCEIFCDE VPKSAENFLA LCASGYYDGT IFHRNIKGFM IQGGDPKGTG KGGTSIWGKK FNDEIRDSLK HNARGMLSMA NSGPNTNGSQ
101: FFITYAKQPH LNGLYTIFGK VIHGFEVLDI MEKTQTGPGD RPLAEIRLNR VTIHANPLAG
101: FFITYAKQPH LNGLYTIFGK VIHGFEVLDI MEKTQTGPGD RPLAEIRLNR VTIHANPLAG
Arabidopsis Description
CYP18-1Peptidyl-prolyl cis-trans isomerase CYP18-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.