Factsheet for GSMUA_Achr11P03590_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P00150_001
GSMUA_Achr1P09980_001
GSMUA_Achr1P11210_001
GSMUA_Achr1P14000_001
GSMUA_Achr1P15330_001
GSMUA_Achr1P18100_001
GSMUA_Achr1P18410_001
GSMUA_Achr1P22460_001
GSMUA_Achr1P22980_001
GSMUA_Achr1P22990_001
GSMUA_Achr3P17030_001
GSMUA_Achr3P22960_001
GSMUA_Achr3P25340_001
GSMUA_Achr4P04810_001
GSMUA_Achr4P17750_001
GSMUA_Achr4P29990_001
GSMUA_Achr4P30300_001
GSMUA_Achr5P03230_001
GSMUA_Achr5P12100_001
GSMUA_Achr5P20730_001
GSMUA_Achr6P32500_001
GSMUA_Achr7P05560_001
GSMUA_Achr8P28790_001
GSMUA_Achr9P10710_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39050.1	GSMUA_Achr10P...	AT1G03140.1	21798944
AT4G39050.1	GSMUA_Achr1P22980_001	AT1G03140.1	21798944
AT4G39050.1	GSMUA_Achr1P22990_001	AT1G03140.1	21798944
AT4G39050.1	GSMUA_Achr1P14000_001	AT1G15570.1	21798944
AT4G39050.1	GSMUA_Achr3P25340_001	AT1G15570.1	21798944
AT4G39050.1	GSMUA_Achr10P...	AT1G55890.1	21798944
AT4G39050.1	GSMUA_Achr1P18100_001	AT2G17670.1	21798944
AT4G39050.1	GSMUA_Achr4P17750_001	AT2G30580.1	21798944
AT4G39050.1	GSMUA_Achr5P03230_001	AT2G30580.1	21798944
AT4G39050.1	GSMUA_Achr9P10710_001	AT2G30580.1	21798944
AT4G39050.1	GSMUA_Achr11P...	AT2G36990.1	21798944
AT4G39050.1	GSMUA_Achr4P30300_001	AT2G36990.1	21798944
AT4G39050.1	GSMUA_Achr11P...	AT3G15360.1	21798944
AT4G39050.1	GSMUA_Achr1P00150_001	AT3G15360.1	21798944
AT4G39050.1	GSMUA_Achr4P29990_001	AT3G15360.1	21798944
AT4G39050.1	GSMUA_Achr5P12100_001	AT3G15360.1	21798944
AT4G39050.1	GSMUA_Achr5P20730_001	AT3G15360.1	21798944
AT4G39050.1	GSMUA_Achr4P04810_001	AT3G60360.1	21798944
AT4G39050.1	GSMUA_Achr6P32500_001	AT3G60360.1	21798944
AT4G39050.1	GSMUA_Achr1P18410_001	AT4G24680.1	21798944
AT4G39050.1	GSMUA_Achr7P05560_001	AT4G24680.1	21798944
AT4G39050.1	GSMUA_Achr3P22960_001	AT4G28230.1	21798944
AT4G39050.1	GSMUA_Achr1P09980_001	AT5G11090.1	21798944
AT4G39050.1	GSMUA_Achr11P...	AT5G22890.1	21798944
AT4G39050.1	GSMUA_Achr1P15330_001	AT5G22890.1	21798944
AT4G39050.1	GSMUA_Achr1P11210_001	AT5G49210.1	21798944
AT4G39050.1	GSMUA_Achr3P17030_001	AT5G63350.1	21798944
AT4G39050.1	GSMUA_Achr8P28790_001	AT5G63350.1	21798944
AT4G39050.1	GSMUA_AchrUn_...	AT5G63350.1	21798944
AT4G39050.1	GSMUA_Achr1P22460_001	AT5G67530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P15980_001	Banana	cytosol	40.53	59.38
GSMUA_Achr7P17300_001	Banana	cytosol	14.93	29.79
GSMUA_AchrUn_...	Banana	cytosol	20.53	24.68
VIT_03s0038g00350.t01	Wine grape	plastid	66.4	22.62
Solyc10g054080.1.1	Tomato	plastid	64.0	22.54
KRH60786	Soybean	plastid	64.27	22.52
Solyc11g044880.1.1	Tomato	plastid	63.47	22.31
KRH51475	Soybean	plastid	63.2	22.15
KRH29374	Soybean	plastid	63.47	22.14
Solyc01g110190.2.1	Tomato	plastid	62.93	22.08
KRH24392	Soybean	plastid	62.93	21.67
CDY22394	Canola	plastid	59.47	21.5
AT4G39050.1	Thale cress	plastid	60.27	21.42
CDX90305	Canola	plastid	58.93	21.39
CDY12116	Canola	plastid	58.67	21.3
CDX72718	Canola	plastid	57.6	21.24
Bra010714.1-P	Field mustard	plastid	58.93	21.03
AT2G21380.2	Thale cress	plastid	58.93	20.89
CDX82022	Canola	plastid	58.4	20.45
Bra031184.1-P	Field mustard	plastid	58.4	20.43
GSMUA_Achr8P11730_001	Banana	plastid	71.73	20.38
Bra033597.1-P	Field mustard	cytosol	59.47	18.29
GSMUA_Achr3P07790_001	Banana	cytosol, plastid	48.8	17.55
GSMUA_Achr7P27470_001	Banana	cytosol	24.0	13.01
GSMUA_Achr4P12880_001	Banana	cytosol	18.93	12.35
GSMUA_Achr1P07780_001	Banana	cytosol	21.33	9.67
GSMUA_Achr1P23180_001	Banana	cytosol, plastid	22.93	9.24
GSMUA_Achr9P18690_001	Banana	cytosol	22.67	9.22
GSMUA_Achr9P28230_001	Banana	cytosol	20.0	8.92
GSMUA_Achr2P03390_001	Banana	cytosol	20.53	8.7
GSMUA_Achr2P11920_001	Banana	nucleus	20.8	8.36
GSMUA_Achr9P04070_001	Banana	cytosol	22.4	7.99
GSMUA_Achr4P01980_001	Banana	cytosol	24.8	7.64
GSMUA_Achr4P24730_001	Banana	cytosol	21.6	7.63
GSMUA_Achr7P15420_001	Banana	cytosol	21.33	7.58
GSMUA_Achr10P...	Banana	cytosol	20.27	7.53
GSMUA_Achr7P05800_001	Banana	cytosol	20.53	7.45
GSMUA_Achr6P33290_001	Banana	cytosol	20.27	7.36
GSMUA_Achr10P...	Banana	cytosol, plastid	21.6	7.18
GSMUA_Achr2P19060_001	Banana	cytosol	19.47	7.12
GSMUA_Achr7P18190_001	Banana	cytosol	21.33	7.1
GSMUA_Achr1P09810_001	Banana	cytosol	18.93	6.84
GSMUA_Achr9P01650_001	Banana	cytosol	20.0	6.68
GSMUA_Achr6P23180_001	Banana	cytosol	22.13	6.68
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	20.27	6.52
GSMUA_Achr9P22550_001	Banana	cytosol	19.47	6.45
GSMUA_Achr9P26550_001	Banana	cytosol, mitochondrion	22.67	6.24
GSMUA_Achr5P23970_001	Banana	cytosol	19.47	5.63
GSMUA_Achr10P...	Banana	cytosol	24.53	3.39
GSMUA_Achr9P15970_001	Banana	cytosol	7.73	2.63
GSMUA_Achr11P...	Banana	endoplasmic reticulum	5.07	2.22
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	5.33	2.1
GSMUA_AchrUn_...	Banana	cytosol	1.6	1.01
GSMUA_Achr4P12870_001	Banana	cytosol	0.27	0.19

Protein Annotations

Gene3D:3.40.850.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
EnsemblPlantsGene:GSMUA_Achr11G03590_001	EnsemblPlants:GSMUA_Achr11P03590_001	EnsemblPlants:GSMUA_Achr11T03590_001	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M0RP39	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF497	SMART:SM00129	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000296176A	SEG:seg	:	:	:	:

Description

Kinesin-related protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G03590_001]

Coordinates

chr11:+:2574359..2586567

Molecular Weight (calculated)

41032.2 Da

IEP (calculated)

9.757

GRAVY (calculated)

-0.273

Length

375 amino acids

Sequence
(BLAST)

001: MVGPYSSSSS RGRSSSPFGH RKPPSTSYSS SSSTSSFANG RLIPRSSPSS VSSHFYGSSS NGGFSRSVTP TRGRAEYSKA RVAPAGFSAE ELVVEPADSG
101: GSGDSISVTV RFRPMSDREF KQGDEMAWYA DGDKIVRSEY SPSTFYAFDR VFGPSTTTQV VYDVSARPIV KAAMEGINEI NFKIIGRKRT VFAYGVTSSG
201: KTHTMHVNFR SHSILGIWQA AAEAKLKFLL DGDPKTPGII PLAIKDVFSI IQDTPGREFL LRVSYLEIYN EVINDLLDPT GQNLRVREDA QGTYVEGIKD
301: EVVLSPGHAL SFIAAGEEHR HVGSNNFNLF SSRSHTIFTL IFPAIILNVI TCLPSKFVFA QKLSRDFSGW TKRQS

Best Arabidopsis Sequence Match ( AT4G39050.1 )
(BLAST)

0001: MASSSSRTRS SRPPSPASST SSSHLSNRLI PRSNSTSASS LITSAAGIAS RSMTPSRTFS DSGLIGSGSF GIGSPVPYPS EELLGDPMDD TISSERDSIS
0101: VTVRFRPLSD REYQRGDEVA WYPDGDTLVR HEYNPLTAYA FDKVFGPQAT TIDVYDVAAR PVVKAAMEGV NGTVFAYGVT SSGKTHTMHG DQESPGIIPL
0201: AIKDVFSIIQ DTPGREFLLR VSYLEIYNEV INDLLDPTGQ NLRVREDSQG TYVEGIKEEV VLSPGHALSF IAAGEEHRHV GSNNFNLLSS RSHTIFTLMV
0301: ESSATGDEYD GVIFSQLNLI DLAGSESSKT ETTGLRRKEG SYINKSLLTL GTVIGKLSEG KATHIPYRDS KLTRLLQSSL SGHGHVSLIC TITPASSSSE
0401: ETHNTLKFAS RAKSIEIYAS RNQIIDEKSL IKKYQREIST LKLELDQLRR GMLVGVSHEE LMSLKQQLEE GQVKMQSRLE EEEEAKAALM SRIQKLTKLI
0501: LVSTKNSIPG YSGDIPTHQR SLSAGKDDKF DSLLLESDNL GSPSSTLALL SEGSLGFNHR RSSSKLNDEN SPGAEFTQGV MTPDEIDLLV EQVKMLAGEI
0601: AFSTSTLKRL VDQSVNDPEN SQTQIQNLER EIHEKQRQMR GLEQLIIESG EASIANASLV EMQQKVMSLM TQCNEKSFEL EIKSADNCIL QEQLQEKCTE
0701: NKELHEKVNL LEQRLNAVSS EKSSPSCSNK AVSGEYADEL KKKIQSQEIE NEELKLEHVQ IVEENSGLRV QNQKLAEEAS YAKELASAAA VELKNLASEV
0801: TKLSLQNTKL EKELAAARDL AQTRNPMNGV NRKYNDGARS GRKGRISSSR SSGDEFDAWN LDPEDLKMEL QVRKQREVAL ESALAEKEFI EDEYRKKAEE
0901: AKRREEALEN DLANMWVLVA KLKKDNGALP EPNGTDPGRE LEKSQSHAVL KERQVSSAPR QPEVVVVAKT EETPKEEPLV ARLKARMQEM KEKEMKSQAN
1001: GDANSHICKV CFESPTAAIL LPCRHFCLCK SCSLACSECP ICRTKISDRL FAFPS

Arabidopsis Description

KIN7DKinesin-like protein KIN-7D, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W5R5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.