Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P17030_001 | Banana | cytosol | 54.33 | 55.07 |
| GSMUA_Achr8P28790_001 | Banana | cytosol | 51.0 | 52.76 |
| TraesCS3D01G219400.1 | Wheat | mitochondrion | 38.0 | 38.0 |
| TraesCS3A01G217400.1 | Wheat | mitochondrion | 37.33 | 37.71 |
| TraesCS3B01G247700.1 | Wheat | mitochondrion | 36.67 | 37.29 |
| KRH63730 | Soybean | plastid | 30.0 | 36.29 |
| KRH54218 | Soybean | plastid | 29.67 | 36.18 |
| PGSC0003DMT400003036 | Potato | cytosol | 8.67 | 35.62 |
| Bra038625.1-P | Field mustard | cytosol | 34.67 | 35.25 |
| Os12t0242500-01 | Rice | extracellular | 38.0 | 34.65 |
| PGSC0003DMT400039289 | Potato | nucleus | 35.67 | 34.63 |
| AT5G50360.1 | Thale cress | nucleus | 33.0 | 34.02 |
| Bra038626.1-P | Field mustard | plastid | 30.0 | 33.58 |
| Bra022512.1-P | Field mustard | nucleus | 31.33 | 33.57 |
| Solyc03g111100.1.1 | Tomato | nucleus | 34.67 | 33.55 |
| KRH03914 | Soybean | plastid | 32.33 | 33.45 |
| AT5G63350.1 | Thale cress | nucleus | 33.67 | 33.44 |
| VIT_14s0171g00360.t01 | Wine grape | nucleus | 31.0 | 33.21 |
| CDY45734 | Canola | nucleus | 32.0 | 32.65 |
| KRH57200 | Soybean | plastid | 31.33 | 32.53 |
| CDX68466 | Canola | cytosol | 32.33 | 32.33 |
| AT3G48510.1 | Thale cress | cytosol | 31.67 | 32.31 |
| Bra029900.1-P | Field mustard | cytosol | 31.0 | 31.1 |
| CDY53329 | Canola | cytosol | 31.0 | 31.1 |
| AT3G27250.1 | Thale cress | cytosol | 29.0 | 30.85 |
| Bra032992.1-P | Field mustard | cytosol | 28.33 | 30.69 |
| Zm00001d023799_P001 | Maize | mitochondrion | 32.33 | 30.5 |
| Zm00001d023800_P001 | Maize | mitochondrion | 32.33 | 30.5 |
| CDX83671 | Canola | cytosol | 28.67 | 30.5 |
| CDY13694 | Canola | cytosol | 28.67 | 30.5 |
| CDY34167 | Canola | cytosol | 28.0 | 30.32 |
| Bra025261.1-P | Field mustard | cytosol | 28.33 | 30.25 |
| EES15909 | Sorghum | peroxisome | 33.33 | 29.94 |
| CDY58582 | Canola | cytosol | 27.67 | 29.54 |
| Solyc02g068030.1.1 | Tomato | cytosol | 27.0 | 28.93 |
| AT5G40800.1 | Thale cress | cytosol | 26.0 | 28.68 |
| KRH57635 | Soybean | plastid | 29.33 | 28.66 |
| AT5G40790.1 | Thale cress | cytosol | 28.67 | 28.38 |
| PGSC0003DMT400062383 | Potato | cytosol | 13.33 | 27.97 |
| Bra019549.1-P | Field mustard | nucleus | 24.0 | 27.91 |
| CDY37923 | Canola | nucleus | 24.0 | 27.91 |
| CDY36383 | Canola | cytosol, plastid | 25.67 | 27.8 |
| CDY52703 | Canola | cytosol, plastid | 25.33 | 27.44 |
| Bra025545.1-P | Field mustard | cytosol, plastid | 25.33 | 27.44 |
| Solyc02g093890.1.1 | Tomato | cytosol | 25.0 | 27.27 |
| KRG94328 | Soybean | cytosol | 28.0 | 27.18 |
| PGSC0003DMT400052105 | Potato | cytosol | 24.67 | 26.24 |
| CDY52704 | Canola | cytosol, nucleus, plastid | 27.0 | 26.13 |
| CDY36382 | Canola | cytosol, nucleus, plastid | 26.33 | 25.65 |
| Bra025546.1-P | Field mustard | cytosol, nucleus, plastid | 26.33 | 25.48 |
| CDY30747 | Canola | cytosol, mitochondrion, nucleus, plastid | 30.67 | 20.54 |
| CDX91547 | Canola | nucleus | 32.0 | 20.13 |
| CDY16370 | Canola | plastid | 32.0 | 19.79 |
| CDY56888 | Canola | cytosol | 15.67 | 18.29 |
| Bra029231.1-P | Field mustard | nucleus | 30.0 | 12.59 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP25040_001 | EnsemblPlants:GSMUA_AchrUn_randomT25040_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG25040_001 | PANTHER:PTHR33595 | PANTHER:PTHR33595:SF3 | SEG:seg |
| UniParc:UPI000296204E | UniProt:M0UC62 | MapMan:35.2 | : | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG25040_001]
Coordinates
chrchrUn_random:-:124203719..124204739
Molecular Weight (calculated)
31838.3 Da
IEP (calculated)
8.881
GRAVY (calculated)
-0.204
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MERRGGCCIA MYGGGVDANV AWKVDRIMLR FRPIAPKPVV GSPTVVAAAP KEASAGARRP KRKGPAISAA AARGRKPRKV EATPLPPPIV DEGKSFSSST
101: IVTLPLMPET PERKGDPAGA PPKWCPTPAA VAPTWMGLGE GEAADVVVAP RPVRAVVSWV TVECVTDTWR EGEVSWRNDK VARAALAADE CPGFVSDEWG
201: GVTWTNEAYR RMVLGEGSGS SCAAGGVEEE EEEEVRVKLV ARGLVPAART CRAFTCRVRV RHAERPKGPP SLAAPCDVWR LDGGGCAWRL DVKAALSLSV
101: IVTLPLMPET PERKGDPAGA PPKWCPTPAA VAPTWMGLGE GEAADVVVAP RPVRAVVSWV TVECVTDTWR EGEVSWRNDK VARAALAADE CPGFVSDEWG
201: GVTWTNEAYR RMVLGEGSGS SCAAGGVEEE EEEEVRVKLV ARGLVPAART CRAFTCRVRV RHAERPKGPP SLAAPCDVWR LDGGGCAWRL DVKAALSLSV
001: MNFRGGCCIA RYGGSGGGND MSKVDRIMLR YRPIAPRPDS GGSPASPTEK NGSVITNVSS RSRRGKRKYS KENNSSSTGS VNSNGNSKRQ RNDETKNGSG
101: GGREIVTLPL LPETPEKKDS PLKAKAAPEL GAAALWLSFN DGASYNRRYQ TELMTETVVS SLLTVECVTE RLMEGEYELG CTDEERKMNL ERDTCPGFIS
201: DGLGRVIWTN GSYRELVVGK DHEQCSKMSV WLVMKEKPLV TYRTFTCRMR LQYTCRDKEV SSITSFCDVW RMSDGGFAWR LDVDAALCLG R
101: GGREIVTLPL LPETPEKKDS PLKAKAAPEL GAAALWLSFN DGASYNRRYQ TELMTETVVS SLLTVECVTE RLMEGEYELG CTDEERKMNL ERDTCPGFIS
201: DGLGRVIWTN GSYRELVVGK DHEQCSKMSV WLVMKEKPLV TYRTFTCRMR LQYTCRDKEV SSITSFCDVW RMSDGGFAWR LDVDAALCLG R
Arabidopsis Description
Uncharacterized protein At5g50360 [Source:UniProtKB/TrEMBL;Acc:Q9FK36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.