Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g111100.1.1 | Tomato | nucleus | 73.79 | 73.55 |
| PGSC0003DMT400062383 | Potato | cytosol | 26.86 | 58.04 |
| PGSC0003DMT400003036 | Potato | cytosol | 11.65 | 49.32 |
| Bra038625.1-P | Field mustard | cytosol | 43.69 | 45.76 |
| KRH57200 | Soybean | plastid | 41.42 | 44.29 |
| KRH03914 | Soybean | plastid | 41.42 | 44.14 |
| Bra022512.1-P | Field mustard | nucleus | 39.48 | 43.57 |
| Bra038626.1-P | Field mustard | plastid | 37.54 | 43.28 |
| AT5G63350.1 | Thale cress | nucleus | 42.07 | 43.05 |
| AT5G50360.1 | Thale cress | nucleus | 39.81 | 42.27 |
| CDY45734 | Canola | nucleus | 40.13 | 42.18 |
| AT3G48510.1 | Thale cress | cytosol | 40.13 | 42.18 |
| KRH54218 | Soybean | plastid | 33.33 | 41.87 |
| Bra029900.1-P | Field mustard | cytosol | 40.45 | 41.81 |
| CDY53329 | Canola | cytosol | 40.45 | 41.81 |
| CDX68466 | Canola | cytosol | 39.81 | 41.0 |
| KRH63730 | Soybean | plastid | 32.69 | 40.73 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 34.63 | 35.67 |
| PGSC0003DMT400052105 | Potato | cytosol | 32.36 | 35.46 |
| GSMUA_Achr3P17030_001 | Banana | cytosol | 33.01 | 34.46 |
| GSMUA_Achr8P28790_001 | Banana | cytosol | 32.04 | 34.14 |
| CDY37923 | Canola | nucleus | 28.48 | 34.11 |
| Bra019549.1-P | Field mustard | nucleus | 28.48 | 34.11 |
| TraesCS3D01G219400.1 | Wheat | mitochondrion | 30.1 | 31.0 |
| TraesCS3B01G247700.1 | Wheat | mitochondrion | 28.16 | 29.49 |
| TraesCS3A01G217400.1 | Wheat | mitochondrion | 28.16 | 29.29 |
| CDY30747 | Canola | cytosol, mitochondrion, nucleus, plastid | 39.81 | 27.46 |
| CDX91547 | Canola | nucleus | 41.42 | 26.83 |
| Os12t0242500-01 | Rice | extracellular | 27.83 | 26.14 |
| CDY16370 | Canola | plastid | 40.45 | 25.77 |
| CDY56888 | Canola | cytosol | 21.36 | 25.68 |
| Zm00001d023799_P001 | Maize | mitochondrion | 25.24 | 24.53 |
| Zm00001d023800_P001 | Maize | mitochondrion | 25.24 | 24.53 |
| EES15909 | Sorghum | peroxisome | 25.89 | 23.95 |
| Bra029231.1-P | Field mustard | nucleus | 38.84 | 16.78 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400039289 | EnsemblPlantsGene:PGSC0003DMG400015196 | EntrezGene:102590433 | PANTHER:PTHR33595 | PANTHER:PTHR33595:SF3 | PGSC:PGSC0003DMG400015196 |
| RefSeq:XP_006351488.1 | SEG:seg | UniParc:UPI0002965CA5 | UniProt:M1B826 | MapMan:35.2 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400015196]
Coordinates
chr3:-:50647649..50649043
Molecular Weight (calculated)
33691.0 Da
IEP (calculated)
10.079
GRAVY (calculated)
-0.577
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGRGGCCIA RYAGGAYDMS KVDRIMLKFR PIAPKPAAAG SSVSGTTTPP QKTEVPVRTG RWKRRYVKEN NKNSNNSKRS NSGSSPSGRK RKAPSPEENE
101: SSGKTVSGGE TVVTLPLLSE SPERKDRSVD VVKKNSPIWL SFGGNQENNN GQSQGYGGVM FPQPVRVVGS WVKVESVTDA WVEGYGLGRT DEEKLINLER
201: DSCPGFISDG LNRVRWANKA YKAMVGEGAG EVVVWLVMKD DVRLPDNKST AAFTCRVRVV RCGKEKNSLI LPCDVWRMDG GGFAWRLDTE AALSLGRYVI
301: KVISTPPEG
101: SSGKTVSGGE TVVTLPLLSE SPERKDRSVD VVKKNSPIWL SFGGNQENNN GQSQGYGGVM FPQPVRVVGS WVKVESVTDA WVEGYGLGRT DEEKLINLER
201: DSCPGFISDG LNRVRWANKA YKAMVGEGAG EVVVWLVMKD DVRLPDNKST AAFTCRVRVV RCGKEKNSLI LPCDVWRMDG GGFAWRLDTE AALSLGRYVI
301: KVISTPPEG
001: MNFRGGCCIA RYGGSGGGND MSKVDRIMLR YRPIAPRPDS GGSPASPTEK NGSVITNVSS RSRRGKRKYS KENNSSSTGS VNSNGNSKRQ RNDETKNGSG
101: GGREIVTLPL LPETPEKKDS PLKAKAAPEL GAAALWLSFN DGASYNRRYQ TELMTETVVS SLLTVECVTE RLMEGEYELG CTDEERKMNL ERDTCPGFIS
201: DGLGRVIWTN GSYRELVVGK DHEQCSKMSV WLVMKEKPLV TYRTFTCRMR LQYTCRDKEV SSITSFCDVW RMSDGGFAWR LDVDAALCLG R
101: GGREIVTLPL LPETPEKKDS PLKAKAAPEL GAAALWLSFN DGASYNRRYQ TELMTETVVS SLLTVECVTE RLMEGEYELG CTDEERKMNL ERDTCPGFIS
201: DGLGRVIWTN GSYRELVVGK DHEQCSKMSV WLVMKEKPLV TYRTFTCRMR LQYTCRDKEV SSITSFCDVW RMSDGGFAWR LDVDAALCLG R
Arabidopsis Description
Uncharacterized protein At5g50360 [Source:UniProtKB/TrEMBL;Acc:Q9FK36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.