Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- mitochondrion 2
- cytosol 3
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g068030.1.1 | Tomato | cytosol | 84.93 | 22.14 |
| PGSC0003DMT400052105 | Potato | cytosol | 57.53 | 14.89 |
| VIT_14s0171g00360.t01 | Wine grape | nucleus | 52.05 | 13.57 |
| AT3G27250.1 | Thale cress | cytosol | 50.68 | 13.12 |
| Bra032992.1-P | Field mustard | cytosol | 49.32 | 13.0 |
| CDY34167 | Canola | cytosol | 49.32 | 13.0 |
| Bra025261.1-P | Field mustard | cytosol | 49.32 | 12.81 |
| CDX83671 | Canola | cytosol | 49.32 | 12.77 |
| CDY13694 | Canola | cytosol | 49.32 | 12.77 |
| AT5G40800.1 | Thale cress | cytosol | 46.58 | 12.5 |
| Bra025545.1-P | Field mustard | cytosol, plastid | 46.58 | 12.27 |
| CDY36383 | Canola | cytosol, plastid | 46.58 | 12.27 |
| CDY52703 | Canola | cytosol, plastid | 46.58 | 12.27 |
| CDY58582 | Canola | cytosol | 46.58 | 12.1 |
| PGSC0003DMT400039289 | Potato | nucleus | 49.32 | 11.65 |
| KRH57635 | Soybean | plastid | 45.21 | 10.75 |
| KRG94328 | Soybean | cytosol | 45.21 | 10.68 |
| CDY52704 | Canola | cytosol, nucleus, plastid | 43.84 | 10.32 |
| CDY36382 | Canola | cytosol, nucleus, plastid | 42.47 | 10.06 |
| AT5G40790.1 | Thale cress | cytosol | 41.1 | 9.9 |
| Bra025546.1-P | Field mustard | cytosol, nucleus, plastid | 41.1 | 9.68 |
| GSMUA_Achr8P28790_001 | Banana | cytosol | 36.99 | 9.31 |
| PGSC0003DMT400062383 | Potato | cytosol | 17.81 | 9.09 |
| TraesCS3B01G247700.1 | Wheat | mitochondrion | 35.62 | 8.81 |
| GSMUA_Achr3P17030_001 | Banana | cytosol | 35.62 | 8.78 |
| TraesCS3A01G217400.1 | Wheat | mitochondrion | 35.62 | 8.75 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 35.62 | 8.67 |
| EES15909 | Sorghum | peroxisome | 38.36 | 8.38 |
| TraesCS3D01G219400.1 | Wheat | mitochondrion | 34.25 | 8.33 |
| Zm00001d023799_P001 | Maize | mitochondrion | 34.25 | 7.86 |
| Zm00001d023800_P001 | Maize | mitochondrion | 34.25 | 7.86 |
| Os12t0242500-01 | Rice | extracellular | 34.25 | 7.6 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400003036 | EnsemblPlantsGene:PGSC0003DMG400001203 | PANTHER:PTHR33595 | PANTHER:PTHR33595:SF4 | PGSC:PGSC0003DMG400001203 | UniParc:UPI0002964349 |
| UniProt:M0ZL25 | MapMan:35.2 | : | : | : | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400001203]
Coordinates
chr1:-:46351021..46352197
Molecular Weight (calculated)
8158.1 Da
IEP (calculated)
9.925
GRAVY (calculated)
0.037
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MVDPLEGSGN SPKLVTWLVV KEKILLPNSS AFACTVRILY TKNSQTMPCD VWKMEFGGFA WRLDAKAALR LGR
001: MDQDDWLGTL RYAGKAQDKV SVDALMLRYR PIAPKPTTGQ PCGVADNNNN SSYGMSKRTK RKYVRVSKNN KGTCRGKSRS DLSDDREQTD VVTLQLLPEK
101: SDISGEYSPL DQDSLDPSVK SIIGEETQET NTWGMFNGSV TAEMETWVTV ESVTSVCEGS LSSHAVGITD VEIVDNLGKD TCPAFVSDGS NRVVWVNEAY
201: RRNVSGDDST ASVSPEVVVW LVAEEATAAM HCNYQAFTCR VRMQYTWKET KYTKTVPCDV WKMEFGGFAW RLDTTAALTL WL
101: SDISGEYSPL DQDSLDPSVK SIIGEETQET NTWGMFNGSV TAEMETWVTV ESVTSVCEGS LSSHAVGITD VEIVDNLGKD TCPAFVSDGS NRVVWVNEAY
201: RRNVSGDDST ASVSPEVVVW LVAEEATAAM HCNYQAFTCR VRMQYTWKET KYTKTVPCDV WKMEFGGFAW RLDTTAALTL WL
Arabidopsis Description
At3g27250 [Source:UniProtKB/TrEMBL;Acc:Q9LK28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.