CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 2
mitochondrion 3
peroxisome 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER96734

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63350.1	EER96734	AT1G80650.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023800_P001	Maize	mitochondrion	60.48	63.52
Zm00001d023799_P001	Maize	mitochondrion	60.48	63.52
Os12t0242500-01	Rice	extracellular	55.99	56.84
TraesCS3A01G217400.1	Wheat	mitochondrion	45.21	50.84
TraesCS3D01G219400.1	Wheat	mitochondrion	45.51	50.67
TraesCS3B01G247700.1	Wheat	mitochondrion	44.61	50.51
PGSC0003DMT400003036	Potato	cytosol	8.38	38.36
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	29.94	33.33
GSMUA_Achr8P28790_001	Banana	cytosol	28.44	32.76
GSMUA_Achr3P17030_001	Banana	cytosol	27.54	31.08
AT5G63350.1	Thale cress	nucleus	27.54	30.46
Bra038625.1-P	Field mustard	cytosol	26.35	29.83
KRH03914	Soybean	plastid	25.45	29.31
AT3G48510.1	Thale cress	cytosol	25.75	29.25
KRH57200	Soybean	plastid	25.15	29.07
KRH63730	Soybean	plastid	21.56	29.03
CDX68466	Canola	cytosol	26.05	29.0
Bra038626.1-P	Field mustard	plastid	23.05	28.73
CDY45734	Canola	nucleus	25.15	28.57
CDY53329	Canola	cytosol	24.85	27.76
Bra029900.1-P	Field mustard	cytosol	24.85	27.76
Solyc03g111100.1.1	Tomato	nucleus	25.45	27.42
AT5G50360.1	Thale cress	nucleus	23.05	26.46
KRH54218	Soybean	plastid	19.16	26.02
PGSC0003DMT400039289	Potato	nucleus	23.95	25.89
VIT_14s0171g00360.t01	Wine grape	nucleus	21.56	25.71
Bra032992.1-P	Field mustard	cytosol	21.26	25.63
CDY34167	Canola	cytosol	21.26	25.63
Bra025261.1-P	Field mustard	cytosol	21.56	25.62
Solyc02g068030.1.1	Tomato	cytosol	21.26	25.36
PGSC0003DMT400062383	Potato	cytosol	10.78	25.17
Bra022512.1-P	Field mustard	nucleus	20.96	25.0
CDY58582	Canola	cytosol	20.96	24.91
CDY13694	Canola	cytosol	20.96	24.82
CDX83671	Canola	cytosol	20.96	24.82
KRH57635	Soybean	plastid	22.75	24.76
PGSC0003DMT400052105	Potato	cytosol	20.66	24.47
KRG94328	Soybean	cytosol	22.46	24.27
AT3G27250.1	Thale cress	cytosol	20.36	24.11
Solyc02g093890.1.1	Tomato	cytosol	19.46	23.64
CDY37923	Canola	nucleus	17.37	22.48
Bra019549.1-P	Field mustard	nucleus	17.37	22.48
Bra025545.1-P	Field mustard	cytosol, plastid	18.56	22.38
CDY36383	Canola	cytosol, plastid	18.56	22.38
AT5G40800.1	Thale cress	cytosol	17.96	22.06
CDY52703	Canola	cytosol, plastid	18.26	22.02
Bra025546.1-P	Field mustard	cytosol, nucleus, plastid	20.36	21.94
CDY52704	Canola	cytosol, nucleus, plastid	20.36	21.94
CDY36382	Canola	cytosol, nucleus, plastid	20.06	21.75
AT5G40790.1	Thale cress	cytosol	19.46	21.45
CDY56888	Canola	cytosol	14.07	18.29
CDY30747	Canola	cytosol, mitochondrion, nucleus, plastid	23.05	17.19
CDX91547	Canola	nucleus	21.86	15.3
CDY16370	Canola	plastid	22.16	15.26
Bra029231.1-P	Field mustard	nucleus	23.65	11.05

Protein Annotations

EnsemblPlants:EES15909	EnsemblPlantsGene:SORBI_3008G087500	EntrezGene:8086147	PANTHER:PTHR33595	PANTHER:PTHR33595:SF3	ProteinID:EES15909
ProteinID:EES15909.1	RefSeq:XP_002442071.1	SEG:seg	unigene:Sbi.10552	UniParc:UPI0001A8817E	UniProt:C5YU44
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:18037998..18040961

Molecular Weight (calculated)

33927.3 Da

IEP (calculated)

9.710

GRAVY (calculated)

-0.147

Length

334 amino acids

Sequence
(BLAST)

001: MERKGGCCLA PRYGAAGPAA AQQQAGAAWQ MGRIMLKFRP IAPKPAAMAP VPAPTPVVAG PSVGAAGRGK RKAVCGAGGG RRGRKPKKAA AVVTAAPALA
101: AAAAQDAGDC KKDCEKEKSS SSRSSSSSGM TSVDSSPPPP QHHLPTLLPL MPVTAVEDKG PAAGAATEEL PAPVPSQVAA AATGSARPFA PRALRPGSAA
201: WAASLVTVEE VTATWRDGEA PPSSAACVAD DAPAFVSDQW GRVTWRNAAF VRAVPADDGG DEVETQTPVA LSGALPAWGT CSGFTCRVRW HSSPRRVGST
301: SSVVAPCDVW RLDAGGSYLW RLDLQAALTL GGRL

Best Arabidopsis Sequence Match ( AT3G48510.1 )
(BLAST)

001: MDGRGGCCIA RYAIGSGPYD LSKADRIMLR FRPIAPKPAS PGGVNPVSSG DSGGGSSDVS FRSASRRKRK CHQLKENGGN AKRCTRRKTS DKPVVHGSAN
101: AVTLSLLPEK PIDLKAAVEK QKRQGPLWLS FKDGGGMLTP AYQTPEIVQR TVVISSCMTV ERVTDAWIDG YGLGRSDEER KMNLVRDTCP GFISDGSGRV
201: TWTNDAYRKM ARDIIPVEEG APEITSGDSF HVIVRLVMRE RPMLTSPGFT CRMKLQYTCQ NRERGSVTVP CDVWRMDVGG GFAWRLDVKA ALCL

Arabidopsis Description

At3g48510 [Source:UniProtKB/TrEMBL;Acc:Q9SMP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.