CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 4
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57635	Soybean	plastid	76.05	76.55
PGSC0003DMT400003036	Potato	cytosol	10.68	45.21
CDY13694	Canola	cytosol	41.1	45.04
Bra025261.1-P	Field mustard	cytosol	40.78	44.84
CDX83671	Canola	cytosol	40.45	44.33
Bra032992.1-P	Field mustard	cytosol	38.19	42.6
CDY34167	Canola	cytosol	38.19	42.6
VIT_14s0171g00360.t01	Wine grape	nucleus	38.19	42.14
CDY58582	Canola	cytosol	37.54	41.28
AT3G27250.1	Thale cress	cytosol	37.22	40.78
AT5G40800.1	Thale cress	cytosol	35.28	40.07
CDY36383	Canola	cytosol, plastid	35.28	39.35
CDY52703	Canola	cytosol, plastid	35.28	39.35
Bra025545.1-P	Field mustard	cytosol, plastid	34.95	38.99
Solyc02g093890.1.1	Tomato	cytosol	34.3	38.55
Solyc02g068030.1.1	Tomato	cytosol	33.01	36.43
KRH03914	Soybean	plastid	33.33	35.52
AT5G40790.1	Thale cress	cytosol	34.63	35.31
PGSC0003DMT400052105	Potato	cytosol	32.04	35.11
KRH54218	Soybean	plastid	27.83	34.96
KRH57200	Soybean	plastid	31.72	33.91
KRH63730	Soybean	plastid	26.86	33.47
CDY52704	Canola	cytosol, nucleus, plastid	31.39	31.29
CDY36382	Canola	cytosol, nucleus, plastid	31.07	31.17
Bra025546.1-P	Field mustard	cytosol, nucleus, plastid	30.42	30.32
GSMUA_Achr3P17030_001	Banana	cytosol	28.16	29.39
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	27.18	28.0
GSMUA_Achr8P28790_001	Banana	cytosol	25.89	27.59
TraesCS3A01G217400.1	Wheat	mitochondrion	25.24	26.26
TraesCS3B01G247700.1	Wheat	mitochondrion	24.6	25.76
TraesCS3D01G219400.1	Wheat	mitochondrion	24.27	25.0
Zm00001d023799_P001	Maize	mitochondrion	23.62	22.96
Zm00001d023800_P001	Maize	mitochondrion	23.62	22.96
EES15909	Sorghum	peroxisome	24.27	22.46
Os12t0242500-01	Rice	extracellular	23.3	21.88

Protein Annotations

EMBL:ACUP02011929	EnsemblPlants:KRG94328	EnsemblPlantsGene:GLYMA_19G076500	EntrezGene:102667957	PANTHER:PTHR33595	PANTHER:PTHR33595:SF4
ProteinID:KRG94328	ProteinID:KRG94328.1	SEG:seg	UniParc:UPI0001BA38B6	UniProt:I1N7F5	MapMan:35.2

Description

hypothetical protein

Coordinates

chr19:-:27578745..27580391

Molecular Weight (calculated)

33458.6 Da

IEP (calculated)

7.086

GRAVY (calculated)

-0.377

Length

309 amino acids

Sequence
(BLAST)

001: MDSADAWRVA ACGNSNVNKI MLRFRPIAPK PVTGISAAEA GSAVGEVTQN NHVSVLGKRP KRKYVRIRRN SGYVRKNNGD SNGKSNGNGN DESSDVAVVT
101: LQLMPEKDAP GGDVTLAGDS WCKNVDLDLT VEKIQIVENR SAPPPRAAAE EGEGGKRSDL VAAAKVAESW VTVESVTGTC MGEGDGEGGR GLLDCTDAEK
201: VKSLEADTCP AFVCDGSLRV RWVNDAYKRM MLEGREGEGE NIVVWLKVKD SAIASWWCYS HPAFTCGVRL QYTWRNEKCT KMVPCDVWRL DCGGFAWRLD
301: VKAALSLGL

Best Arabidopsis Sequence Match ( AT3G27250.1 )
(BLAST)

001: MDQDDWLGTL RYAGKAQDKV SVDALMLRYR PIAPKPTTGQ PCGVADNNNN SSYGMSKRTK RKYVRVSKNN KGTCRGKSRS DLSDDREQTD VVTLQLLPEK
101: SDISGEYSPL DQDSLDPSVK SIIGEETQET NTWGMFNGSV TAEMETWVTV ESVTSVCEGS LSSHAVGITD VEIVDNLGKD TCPAFVSDGS NRVVWVNEAY
201: RRNVSGDDST ASVSPEVVVW LVAEEATAAM HCNYQAFTCR VRMQYTWKET KYTKTVPCDV WKMEFGGFAW RLDTTAALTL WL

Arabidopsis Description

At3g27250 [Source:UniProtKB/TrEMBL;Acc:Q9LK28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.