Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH09670 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G63350.1 | KRH09670 | AT1G80650.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57200 | Soybean | plastid | 80.69 | 80.97 |
| KRH54218 | Soybean | plastid | 42.76 | 50.41 |
| KRH63730 | Soybean | plastid | 42.41 | 49.6 |
| Bra038625.1-P | Field mustard | cytosol | 47.93 | 47.12 |
| Bra038626.1-P | Field mustard | plastid | 42.76 | 46.27 |
| AT5G63350.1 | Thale cress | nucleus | 45.52 | 43.71 |
| AT3G48510.1 | Thale cress | cytosol | 44.14 | 43.54 |
| CDY45734 | Canola | nucleus | 43.79 | 43.2 |
| Bra029900.1-P | Field mustard | cytosol | 43.45 | 42.14 |
| CDY53329 | Canola | cytosol | 43.45 | 42.14 |
| CDX68466 | Canola | cytosol | 43.45 | 42.0 |
| PGSC0003DMT400039289 | Potato | nucleus | 44.14 | 41.42 |
| Solyc03g111100.1.1 | Tomato | nucleus | 43.45 | 40.65 |
| AT5G50360.1 | Thale cress | nucleus | 39.31 | 39.18 |
| Bra022512.1-P | Field mustard | nucleus | 36.55 | 37.86 |
| CDY37923 | Canola | nucleus | 33.45 | 37.6 |
| Bra019549.1-P | Field mustard | nucleus | 33.45 | 37.6 |
| PGSC0003DMT400062383 | Potato | cytosol | 17.24 | 34.97 |
| KRH57635 | Soybean | plastid | 36.9 | 34.85 |
| GSMUA_Achr3P17030_001 | Banana | cytosol | 35.17 | 34.46 |
| KRG94328 | Soybean | cytosol | 35.52 | 33.33 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 33.45 | 32.33 |
| GSMUA_Achr8P28790_001 | Banana | cytosol | 30.69 | 30.69 |
| TraesCS3B01G247700.1 | Wheat | mitochondrion | 30.69 | 30.17 |
| TraesCS3A01G217400.1 | Wheat | mitochondrion | 30.34 | 29.63 |
| TraesCS3D01G219400.1 | Wheat | mitochondrion | 30.34 | 29.33 |
| CDY30747 | Canola | cytosol, mitochondrion, nucleus, plastid | 41.38 | 26.79 |
| Os12t0242500-01 | Rice | extracellular | 28.97 | 25.53 |
| EES15909 | Sorghum | peroxisome | 29.31 | 25.45 |
| CDY56888 | Canola | cytosol | 22.07 | 24.9 |
| Zm00001d023799_P001 | Maize | mitochondrion | 27.24 | 24.84 |
| Zm00001d023800_P001 | Maize | mitochondrion | 27.24 | 24.84 |
| CDX91547 | Canola | nucleus | 36.55 | 22.22 |
| CDY16370 | Canola | plastid | 36.9 | 22.06 |
| Bra029231.1-P | Field mustard | nucleus | 39.66 | 16.08 |
Protein Annotations
| EMBL:ACUP02010369 | EnsemblPlants:KRH03914 | EnsemblPlantsGene:GLYMA_17G127900 | EntrezGene:100812834 | PANTHER:PTHR33595 | PANTHER:PTHR33595:SF3 |
| ProteinID:KRH03914 | ProteinID:KRH03914.1 | SEG:seg | UniParc:UPI000233E672 | UniProt:I1MUM6 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr17:-:10221861..10223886
Molecular Weight (calculated)
32111.3 Da
IEP (calculated)
9.827
GRAVY (calculated)
-0.594
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGRGGCCIA RYVPGASHGS TVDKIMLRFR PIAPKPAAAA TASDGSSSES SDAFLKNGTT KRKYVRDNNY TSKRRIRRRK NTSSPEKKQK PVVTLPLLPE
101: TPDRKDSRAK DLTPSPAKPV RNNNNNNNKS KNLNIINKNV PVWVSFENRS LTMMGGWCSC VTVEGVTDTC LESEWLGSTD EERRLNLSND TCPGFISDGY
201: GRVTWTNEAY GKMMMMKGEG DEGQGPVLLV NKVNTVVPHA SFTCLVRVVQ YSCGKERNSL TVPCDVWRMD CGGFAWRLDV KTALSLRLGY
101: TPDRKDSRAK DLTPSPAKPV RNNNNNNNKS KNLNIINKNV PVWVSFENRS LTMMGGWCSC VTVEGVTDTC LESEWLGSTD EERRLNLSND TCPGFISDGY
201: GRVTWTNEAY GKMMMMKGEG DEGQGPVLLV NKVNTVVPHA SFTCLVRVVQ YSCGKERNSL TVPCDVWRMD CGGFAWRLDV KTALSLRLGY
001: MDGRGGCCIA RYGGYGGRYG LSKADRIMLR FRPIAPKPAS DGGSVSLTGK SGSTTTTSGG SSDLSGKSGR GKRKYQKDCS GGNSRRCNKK KRDLSGDTAT
101: TTAVTLSLLP ETPEKRVFPD LNAFPVEKQK RNGPLWLSFN GGGEILTPYK TAEISRRTVV VSSCVTVERV TDAWIDGYGL GETNQERKMN LVEDTCPGFI
201: SDGVGRVTWT NEAYKKMARE DINIPMEEGV PEDISYDNFH VNVRLVMKER PMLTYPAFTC RVRLQYTCQD RERGSVTVPC DVWRMDGGGF AWRLDVKAAL
301: CL
101: TTAVTLSLLP ETPEKRVFPD LNAFPVEKQK RNGPLWLSFN GGGEILTPYK TAEISRRTVV VSSCVTVERV TDAWIDGYGL GETNQERKMN LVEDTCPGFI
201: SDGVGRVTWT NEAYKKMARE DINIPMEEGV PEDISYDNFH VNVRLVMKER PMLTYPAFTC RVRLQYTCQD RERGSVTVPC DVWRMDGGGF AWRLDVKAAL
301: CL
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FGW7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.