Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022512.1-P | Field mustard | nucleus | 65.98 | 68.57 |
| AT5G63350.1 | Thale cress | nucleus | 47.77 | 46.03 |
| AT3G48510.1 | Thale cress | cytosol | 45.36 | 44.9 |
| KRH54218 | Soybean | plastid | 35.4 | 41.87 |
| Solyc03g111100.1.1 | Tomato | nucleus | 42.96 | 40.32 |
| KRH63730 | Soybean | plastid | 34.02 | 39.92 |
| PGSC0003DMT400039289 | Potato | nucleus | 42.27 | 39.81 |
| CDX91547 | Canola | nucleus | 64.6 | 39.41 |
| KRH03914 | Soybean | plastid | 39.18 | 39.31 |
| CDY16370 | Canola | plastid | 62.54 | 37.53 |
| KRH57200 | Soybean | plastid | 37.11 | 37.37 |
| PGSC0003DMT400062383 | Potato | cytosol | 17.87 | 36.36 |
| AT5G40800.1 | Thale cress | cytosol | 32.3 | 34.56 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 34.02 | 33.0 |
| AT3G27250.1 | Thale cress | cytosol | 31.62 | 32.62 |
| GSMUA_Achr3P17030_001 | Banana | cytosol | 32.99 | 32.43 |
| GSMUA_Achr8P28790_001 | Banana | cytosol | 32.3 | 32.41 |
| AT5G40790.1 | Thale cress | cytosol | 29.9 | 28.71 |
| TraesCS3B01G247700.1 | Wheat | mitochondrion | 27.15 | 26.78 |
| TraesCS3A01G217400.1 | Wheat | mitochondrion | 26.8 | 26.26 |
| TraesCS3D01G219400.1 | Wheat | mitochondrion | 26.46 | 25.67 |
| EES15909 | Sorghum | peroxisome | 26.46 | 23.05 |
| Os12t0242500-01 | Rice | extracellular | 25.77 | 22.8 |
| Zm00001d023799_P001 | Maize | mitochondrion | 22.68 | 20.75 |
| Zm00001d023800_P001 | Maize | mitochondrion | 22.68 | 20.75 |
Protein Annotations
| MapMan:35.2 | EntrezGene:835103 | ProteinID:AED95932.1 | EMBL:AF370321 | ArrayExpress:AT5G50360 | EnsemblPlantsGene:AT5G50360 |
| RefSeq:AT5G50360 | TAIR:AT5G50360 | RefSeq:AT5G50360-TAIR-G | EnsemblPlants:AT5G50360.1 | TAIR:AT5G50360.1 | EMBL:AY063109 |
| EMBL:AY084315 | Unigene:At.6854 | ProteinID:BAB09455.1 | GO:GO:0008150 | RefSeq:NP_199847.1 | PO:PO:0007616 |
| PO:PO:0009029 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025281 | PANTHER:PTHR33595 | PANTHER:PTHR33595:SF3 |
| UniProt:Q9FK36 | UniParc:UPI000005EAAA | SEG:seg | : | : | : |
Description
Uncharacterized protein At5g50360 [Source:UniProtKB/TrEMBL;Acc:Q9FK36]
Coordinates
chr5:-:20505089..20506354
Molecular Weight (calculated)
32297.3 Da
IEP (calculated)
8.818
GRAVY (calculated)
-0.647
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFRGGCCIA RYGGSGGGND MSKVDRIMLR YRPIAPRPDS GGSPASPTEK NGSVITNVSS RSRRGKRKYS KENNSSSTGS VNSNGNSKRQ RNDETKNGSG
101: GGREIVTLPL LPETPEKKDS PLKAKAAPEL GAAALWLSFN DGASYNRRYQ TELMTETVVS SLLTVECVTE RLMEGEYELG CTDEERKMNL ERDTCPGFIS
201: DGLGRVIWTN GSYRELVVGK DHEQCSKMSV WLVMKEKPLV TYRTFTCRMR LQYTCRDKEV SSITSFCDVW RMSDGGFAWR LDVDAALCLG R
101: GGREIVTLPL LPETPEKKDS PLKAKAAPEL GAAALWLSFN DGASYNRRYQ TELMTETVVS SLLTVECVTE RLMEGEYELG CTDEERKMNL ERDTCPGFIS
201: DGLGRVIWTN GSYRELVVGK DHEQCSKMSV WLVMKEKPLV TYRTFTCRMR LQYTCRDKEV SSITSFCDVW RMSDGGFAWR LDVDAALCLG R
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.