CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91547	Canola	nucleus	85.15	86.58
AT5G50360.1	Thale cress	nucleus	37.53	62.54
CDY53329	Canola	cytosol	27.42	44.48
CDX68466	Canola	cytosol	27.01	43.67
CDY45734	Canola	nucleus	26.19	43.2
PGSC0003DMT400039289	Potato	nucleus	25.77	40.45
Solyc03g111100.1.1	Tomato	nucleus	25.77	40.32
KRH54218	Soybean	plastid	20.0	39.43
CDY37923	Canola	nucleus	20.62	38.76
KRH63730	Soybean	plastid	19.59	38.31
KRH03914	Soybean	plastid	22.06	36.9
KRH57200	Soybean	plastid	21.03	35.29
PGSC0003DMT400062383	Potato	cytosol	9.9	33.57
CDY58582	Canola	cytosol	18.76	32.38
CDY30747	Canola	cytosol, mitochondrion, nucleus, plastid	29.9	32.37
CDY34167	Canola	cytosol	18.35	32.13
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	19.79	32.0
GSMUA_Achr8P28790_001	Banana	cytosol	18.97	31.72
CDY52703	Canola	cytosol, plastid	17.94	31.41
CDX83671	Canola	cytosol	18.14	31.21
GSMUA_Achr3P17030_001	Banana	cytosol	18.97	31.08
CDY36383	Canola	cytosol, plastid	17.73	31.05
CDY13694	Canola	cytosol	17.94	30.85
CDY56888	Canola	cytosol	15.05	28.4
CDY52704	Canola	cytosol, nucleus, plastid	17.53	27.42
CDY36382	Canola	cytosol, nucleus, plastid	17.32	27.27
TraesCS3D01G219400.1	Wheat	mitochondrion	14.85	24.0
TraesCS3B01G247700.1	Wheat	mitochondrion	14.23	23.39
TraesCS3A01G217400.1	Wheat	mitochondrion	14.23	23.23
EES15909	Sorghum	peroxisome	15.26	22.16
Os12t0242500-01	Rice	extracellular	14.85	21.88
Zm00001d023799_P001	Maize	mitochondrion	14.23	21.7
Zm00001d023800_P001	Maize	mitochondrion	14.23	21.7

Protein Annotations

EnsemblPlants:CDY16370	EnsemblPlantsGene:GSBRNA2T00090901001	PANTHER:PTHR33595	PANTHER:PTHR33595:SF3	ProteinID:CDY16370	ProteinID:CDY16370.1
SEG:seg	UniParc:UPI0004EE3CE3	UniProt:A0A078FPH3	MapMan:35.2	:	:

Description

BnaA02g11740DBnaA02g11740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPH3]

Coordinates

chrLK032063:-:204453..206861

Molecular Weight (calculated)

53662.6 Da

IEP (calculated)

9.119

GRAVY (calculated)

-0.315

Length

485 amino acids

Sequence
(BLAST)

001: MNFRGGCCIA RYGGSGGGGD MSKVDRIMLR YRPIAPRPDS GGSSSPPLDS VSPKSRRGKR KYSKENSSSS GGSVNSNGNS KRRRNEEAKN GSETVTLPLL
101: PETPERRKEP PRVLVPAAAS SWLSFGDDGR YQAAKKSLDL TEGLLTARTE TVVSSLLTVE CVTEGEYELG CTDEEKKMNL ERDTCPGFIS DGLGRVVWTN
201: DLVIGKDKCC SKMSVWLVMK EKPLLTKRTF TCRMRLQYTC RDSLVSSITS PCDGWKMNDG GFAWRLDVNA ALFLGRHELQ SRDGGRALLK TIIKLLDMNF
301: DDDEVLSLVE KYGIEETEDA IKKIPRSKFM NIFSPMQNEN FLKDIFNLNK DTQEYLDSRG LSIALRSLGF VFSEVNAQNL AHRLTGSGSA FGFNYRVRLS
401: LRSFCEIACL ACIHMNVVRE VPVGAMIVAM VGFLPKPSPS PTVSASSNNT ASPIPPLLPF IYNKNKNLGS IVLMSYYVFT LFMGR

Best Arabidopsis Sequence Match ( AT5G50360.1 )
(BLAST)

001: MNFRGGCCIA RYGGSGGGND MSKVDRIMLR YRPIAPRPDS GGSPASPTEK NGSVITNVSS RSRRGKRKYS KENNSSSTGS VNSNGNSKRQ RNDETKNGSG
101: GGREIVTLPL LPETPEKKDS PLKAKAAPEL GAAALWLSFN DGASYNRRYQ TELMTETVVS SLLTVECVTE RLMEGEYELG CTDEERKMNL ERDTCPGFIS
201: DGLGRVIWTN GSYRELVVGK DHEQCSKMSV WLVMKEKPLV TYRTFTCRMR LQYTCRDKEV SSITSFCDVW RMSDGGFAWR LDVDAALCLG R

Arabidopsis Description

Uncharacterized protein At5g50360 [Source:UniProtKB/TrEMBL;Acc:Q9FK36]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.