CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36382	Canola	cytosol, nucleus, plastid	96.45	97.08
Bra025546.1-P	Field mustard	cytosol, nucleus, plastid	89.68	89.68
AT5G40790.1	Thale cress	cytosol	51.94	53.14
PGSC0003DMT400003036	Potato	cytosol	10.32	43.84
VIT_14s0171g00360.t01	Wine grape	nucleus	34.19	37.86
KRH57635	Soybean	plastid	32.58	32.9
CDY34167	Canola	cytosol	29.35	32.85
CDX83671	Canola	cytosol	29.68	32.62
Solyc02g068030.1.1	Tomato	cytosol	29.35	32.5
CDY58582	Canola	cytosol	29.03	32.03
CDY13694	Canola	cytosol	29.03	31.91
CDY52703	Canola	cytosol, plastid	28.06	31.41
KRG94328	Soybean	cytosol	31.29	31.39
CDY36383	Canola	cytosol, plastid	27.74	31.05
Solyc02g093890.1.1	Tomato	cytosol	27.42	30.91
PGSC0003DMT400052105	Potato	cytosol	27.1	29.79
CDY45734	Canola	nucleus	27.74	29.25
CDY53329	Canola	cytosol	28.06	29.1
CDX68466	Canola	cytosol	27.74	28.67
GSMUA_Achr8P28790_001	Banana	cytosol	25.81	27.59
CDY37923	Canola	nucleus	22.58	27.13
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	26.13	27.0
GSMUA_Achr3P17030_001	Banana	cytosol	25.16	26.35
TraesCS3B01G247700.1	Wheat	mitochondrion	21.61	22.71
TraesCS3A01G217400.1	Wheat	mitochondrion	21.61	22.56
TraesCS3D01G219400.1	Wheat	mitochondrion	21.61	22.33
CDY56888	Canola	cytosol	17.42	21.01
EES15909	Sorghum	peroxisome	21.94	20.36
Zm00001d023799_P001	Maize	mitochondrion	20.32	19.81
Zm00001d023800_P001	Maize	mitochondrion	20.32	19.81
CDX91547	Canola	nucleus	29.68	19.29
Os12t0242500-01	Rice	extracellular	20.32	19.15
CDY30747	Canola	cytosol, mitochondrion, nucleus, plastid	27.42	18.97
CDY16370	Canola	plastid	27.42	17.53

Protein Annotations

EnsemblPlants:CDY52704	EnsemblPlantsGene:GSBRNA2T00007624001	PANTHER:PTHR33595	PANTHER:PTHR33595:SF4	ProteinID:CDY52704	ProteinID:CDY52704.1
SEG:seg	UniParc:UPI0004EDFBA6	UniProt:A0A078ITF0	MapMan:35.2	:	:

Description

BnaA04g10610DBnaA04g10610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITF0]

Coordinates

chrLK033119:+:63977..64909

Molecular Weight (calculated)

35404.9 Da

IEP (calculated)

7.594

GRAVY (calculated)

-0.734

Length

310 amino acids

Sequence
(BLAST)

001: MKTDYGKQRE ASACDDVTDQ DKTVVSRIMQ RFRPIAPKPP VGESSDDTKS CRFLRRNRRF KRKYVRVRNK NISSGRSNNN KDMICSNKKA CGDGEKIKTD
101: LDEEIGGEDK SDIVTLQLLP DKDKDHQAGK DNTDPSDMDP RTSLNISSSL DRTVVESWLT VECVNNTCTE LGGYHKLQLS RMNEGEEIVM RMLYFDTCPW
201: LVSDGSNRVY WINRAYRNML GDPKAEVTIK VWLVVATDLM EEMSCMVESY GAVTCRVRVR YDTSTWRNEK SHSESEVKMT VPCDVWRMGS SGGLAWRLDV
301: ESALTLGRYN

Best Arabidopsis Sequence Match ( AT5G40790.1 )
(BLAST)

001: MHGNGKQCQA SICDGATDQD KTVISKIMQR FRPIAPKPAV GESSDDTNSD RFLGRNRRSK RKYVRVRDKK NSSGSNNKKD ITGKKNGCDR GNIKTDLDKK
101: IDGDDRTDIV TLQLLPEKDR DIGNNGDKAG EFCSDLSDMD PKKSLYNSII GLSSSFDRKV VESWLTVECV SDTCTDLGWY HILEQLGRMD QAEERVMRML
201: EVDTCPWLVS DGSNRVCWVN RAYRRMMGAP DVDVIRVWLV VAMDLMEEIA CMVELYGAVT CRVRVRYEPS TWRKMTVPCD VWRIRSGGFA WRLDVESALR
301: LGM

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FKS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.