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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g093890.1.1 Tomato cytosol 76.95 78.91
PGSC0003DMT400003036 Potato cytosol 14.89 57.53
VIT_14s0171g00360.t01 Wine grape nucleus 40.78 41.07
AT5G40800.1 Thale cress cytosol 36.52 37.87
AT3G27250.1 Thale cress cytosol 35.11 35.11
Bra032992.1-P Field mustard cytosol 34.4 35.02
CDY34167 Canola cytosol 34.4 35.02
CDX83671 Canola cytosol 34.75 34.75
CDY58582 Canola cytosol 34.4 34.52
Bra025261.1-P Field mustard cytosol 34.04 34.16
CDY13694 Canola cytosol 34.04 34.04
CDY52703 Canola cytosol, plastid 33.33 33.94
CDY36383 Canola cytosol, plastid 32.98 33.57
Bra025545.1-P Field mustard cytosol, plastid 32.98 33.57
KRH57635 Soybean plastid 35.82 32.9
PGSC0003DMT400039289 Potato nucleus 35.46 32.36
KRG94328 Soybean cytosol 35.11 32.04
AT5G40790.1 Thale cress cytosol 32.98 30.69
PGSC0003DMT400062383 Potato cytosol 15.25 30.07
Bra025546.1-P Field mustard cytosol, nucleus, plastid 30.5 27.74
CDY52704 Canola cytosol, nucleus, plastid 29.79 27.1
CDY36382 Canola cytosol, nucleus, plastid 29.08 26.62
GSMUA_Achr3P17030_001 Banana cytosol 27.66 26.35
GSMUA_Achr8P28790_001 Banana cytosol 26.24 25.52
GSMUA_AchrUn_... Banana cytosol, nucleus, peroxisome 26.24 24.67
TraesCS3B01G247700.1 Wheat mitochondrion 23.76 22.71
TraesCS3D01G219400.1 Wheat mitochondrion 23.4 22.0
TraesCS3A01G217400.1 Wheat mitochondrion 22.7 21.55
EES15909 Sorghum peroxisome 24.47 20.66
Os12t0242500-01 Rice extracellular 23.4 20.06
Zm00001d023799_P001 Maize mitochondrion 21.28 18.87
Zm00001d023800_P001 Maize mitochondrion 21.28 18.87
Protein Annotations
EnsemblPlants:PGSC0003DMT400052105EnsemblPlantsGene:PGSC0003DMG400020225EntrezGene:102597777PANTHER:PTHR33595PANTHER:PTHR33595:SF4PGSC:PGSC0003DMG400020225
RefSeq:XP_006338674.1SEG:segUniParc:UPI0002959F6BUniProt:M1BST7MapMan:35.2:
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400020225]
Coordinates
chr2:-:47797309..47799759
Molecular Weight (calculated)
31221.8 Da
IEP (calculated)
9.790
GRAVY (calculated)
-0.314
Length
282 amino acids
Sequence
(BLAST)
001: MDLANTWAGP GCTGTPKDTT IINQMMLRFR PIAPKPVANS SGPGSTPETL VVGKRRTKRK YVRVKKNNQC KINKKEKSDG SSDDHQTAVT LQLLPESSGG
101: VKSLPENRSY PKTINFLVQD RSIWINNNIL SIGAPDPSVE IRSPMVVESW VMVDGLTNTT LVDLSALGST DMEKMMNLQR DTCPGFISDG LDSVKWVNLA
201: YRRMIDPVED GGEPPEMAVR LVVKENKSAA LLLLPSFACI VRIVYTWNKV KQSRTMPCDV WKMDFGGFAW KFDAKAALSL GR
Best Arabidopsis Sequence Match ( AT3G27250.1 )
(BLAST)
001: MDQDDWLGTL RYAGKAQDKV SVDALMLRYR PIAPKPTTGQ PCGVADNNNN SSYGMSKRTK RKYVRVSKNN KGTCRGKSRS DLSDDREQTD VVTLQLLPEK
101: SDISGEYSPL DQDSLDPSVK SIIGEETQET NTWGMFNGSV TAEMETWVTV ESVTSVCEGS LSSHAVGITD VEIVDNLGKD TCPAFVSDGS NRVVWVNEAY
201: RRNVSGDDST ASVSPEVVVW LVAEEATAAM HCNYQAFTCR VRMQYTWKET KYTKTVPCDV WKMEFGGFAW RLDTTAALTL WL
Arabidopsis Description
At3g27250 [Source:UniProtKB/TrEMBL;Acc:Q9LK28]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.