CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94328	Soybean	cytosol	76.55	76.05
PGSC0003DMT400003036	Potato	cytosol	10.75	45.21
Bra025261.1-P	Field mustard	cytosol	41.37	45.2
VIT_14s0171g00360.t01	Wine grape	nucleus	41.04	45.0
CDY13694	Canola	cytosol	41.04	44.68
CDX83671	Canola	cytosol	40.39	43.97
CDY58582	Canola	cytosol	39.41	43.06
Bra032992.1-P	Field mustard	cytosol	38.76	42.96
CDY34167	Canola	cytosol	38.76	42.96
AT3G27250.1	Thale cress	cytosol	38.44	41.84
AT5G40800.1	Thale cress	cytosol	36.81	41.54
CDY36383	Canola	cytosol, plastid	36.48	40.43
CDY52703	Canola	cytosol, plastid	36.48	40.43
Bra025545.1-P	Field mustard	cytosol, plastid	36.16	40.07
KRH63730	Soybean	plastid	29.97	37.1
Solyc02g093890.1.1	Tomato	cytosol	33.22	37.09
KRH03914	Soybean	plastid	34.85	36.9
KRH54218	Soybean	plastid	28.99	36.18
PGSC0003DMT400052105	Potato	cytosol	32.9	35.82
AT5G40790.1	Thale cress	cytosol	35.18	35.64
KRH57200	Soybean	plastid	33.55	35.64
Solyc02g068030.1.1	Tomato	cytosol	32.25	35.36
CDY52704	Canola	cytosol, nucleus, plastid	32.9	32.58
Bra025546.1-P	Field mustard	cytosol, nucleus, plastid	32.9	32.58
CDY36382	Canola	cytosol, nucleus, plastid	32.25	32.14
GSMUA_Achr3P17030_001	Banana	cytosol	30.29	31.42
GSMUA_Achr8P28790_001	Banana	cytosol	28.66	30.34
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	28.66	29.33
TraesCS3B01G247700.1	Wheat	mitochondrion	26.06	27.12
TraesCS3A01G217400.1	Wheat	mitochondrion	25.73	26.6
TraesCS3D01G219400.1	Wheat	mitochondrion	25.08	25.67
Zm00001d023799_P001	Maize	mitochondrion	25.73	24.84
Zm00001d023800_P001	Maize	mitochondrion	25.73	24.84
EES15909	Sorghum	peroxisome	24.76	22.75
Os12t0242500-01	Rice	extracellular	24.1	22.49

Protein Annotations

EMBL:ACUP02002872	EnsemblPlants:KRH57635	EnsemblPlantsGene:GLYMA_05G074200	EntrezGene:102663301	PANTHER:PTHR33595	PANTHER:PTHR33595:SF4
ProteinID:KRH57635	ProteinID:KRH57635.1	SEG:seg	UniParc:UPI00023C4E4D	UniProt:I1K145	MapMan:35.2

Description

hypothetical protein

Coordinates

chr5:+:8661906..8663066

Molecular Weight (calculated)

33508.9 Da

IEP (calculated)

8.063

GRAVY (calculated)

-0.375

Length

307 amino acids

Sequence
(BLAST)

001: MDGADAWRVA ACANTNVNRI MLRFRPIAPK PVAGSSAVSR ATGAGDGSQS SHVSVLGKRP KRKYVRIRRN GGYVRKNNGN SNRKSNCNCN DESSDVAVVT
101: LQLMPEKDAP EGDVTLAGDS WCKNVDLDLT VEKIQIVENR SVPPPRLVVE EGEGAKGSDL VPAAKAAESW VTVESVTGTC MGEGEGGRGL LSCTDEERVK
201: SLETDTCPGF VCDGSLRVRW VNDAYKRMVL EGRKGEGEDI MVWLKVKDSA CAAWWCYSHP AFTCGVRLQY TWRNEKCTKM VPCDVWRLDC GGFAWRLDVK
301: AALSLGL

Best Arabidopsis Sequence Match ( AT3G27250.1 )
(BLAST)

001: MDQDDWLGTL RYAGKAQDKV SVDALMLRYR PIAPKPTTGQ PCGVADNNNN SSYGMSKRTK RKYVRVSKNN KGTCRGKSRS DLSDDREQTD VVTLQLLPEK
101: SDISGEYSPL DQDSLDPSVK SIIGEETQET NTWGMFNGSV TAEMETWVTV ESVTSVCEGS LSSHAVGITD VEIVDNLGKD TCPAFVSDGS NRVVWVNEAY
201: RRNVSGDDST ASVSPEVVVW LVAEEATAAM HCNYQAFTCR VRMQYTWKET KYTKTVPCDV WKMEFGGFAW RLDTTAALTL WL

Arabidopsis Description

At3g27250 [Source:UniProtKB/TrEMBL;Acc:Q9LK28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.