Factsheet for Solyc02g068030.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003036	Potato	cytosol	22.14	84.93
Solyc02g093890.1.1	Tomato	cytosol	47.14	48.0
VIT_14s0171g00360.t01	Wine grape	nucleus	45.0	45.0
Solyc03g111100.1.1	Tomato	nucleus	41.07	37.1
AT3G27250.1	Thale cress	cytosol	36.79	36.52
CDX83671	Canola	cytosol	36.79	36.52
AT5G40800.1	Thale cress	cytosol	35.36	36.4
CDY13694	Canola	cytosol	36.43	36.17
CDY34167	Canola	cytosol	35.0	35.38
Bra032992.1-P	Field mustard	cytosol	35.0	35.38
Bra025261.1-P	Field mustard	cytosol	35.36	35.23
CDY58582	Canola	cytosol	35.0	34.88
CDY36383	Canola	cytosol, plastid	33.57	33.94
CDY52703	Canola	cytosol, plastid	33.57	33.94
Bra025545.1-P	Field mustard	cytosol, plastid	32.86	33.21
KRG94328	Soybean	cytosol	36.43	33.01
AT5G40790.1	Thale cress	cytosol	35.36	32.67
KRH57635	Soybean	plastid	35.36	32.25
CDY52704	Canola	cytosol, nucleus, plastid	32.5	29.35
Bra025546.1-P	Field mustard	cytosol, nucleus, plastid	32.14	29.03
CDY36382	Canola	cytosol, nucleus, plastid	31.79	28.9
GSMUA_Achr3P17030_001	Banana	cytosol	29.29	27.7
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	28.93	27.0
GSMUA_Achr8P28790_001	Banana	cytosol	27.5	26.55
TraesCS3B01G247700.1	Wheat	mitochondrion	25.36	24.07
TraesCS3D01G219400.1	Wheat	mitochondrion	25.71	24.0
TraesCS3A01G217400.1	Wheat	mitochondrion	25.36	23.91
EES15909	Sorghum	peroxisome	25.36	21.26
Zm00001d023799_P001	Maize	mitochondrion	23.57	20.75
Zm00001d023800_P001	Maize	mitochondrion	23.57	20.75
Os12t0242500-01	Rice	extracellular	22.86	19.45

Protein Annotations

EnsemblPlants:Solyc02g068030.1.1	EnsemblPlantsGene:Solyc02g068030.1	PANTHER:PTHR33595	PANTHER:PTHR33595:SF4	SEG:seg	UniParc:UPI0002767753
UniProt:K4B7D5	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr2:-:38083957..38084799

Molecular Weight (calculated)

31058.1 Da

IEP (calculated)

9.575

GRAVY (calculated)

-0.559

Length

280 amino acids

Sequence
(BLAST)

001: MDGGNGFPAA KYAGGKNDTT IMNRIMLRFR PIAPKPVAGG SSDGSTPENN NMELVTKRRA KRKYVRVKKS SKCKSNKEDE ANKDGSSLYE DNGAGITLQL
101: MPQSSSGVRN SLENSGSRPF WMNFQKSENS EIFPVGSDQI DRTVEMQKKR VVESWVMVDQ ITNALVDGEA LGSTDTEKMK NLEADTCPGL ISDGLDRVRW
201: VNLAYRRMVD PLEGSGNSPE LVTWLVVKEK ILLPNSSAFA CTVRILYTKN SQTMPCDVWK MEFGGFAWRL DAKAALRLGR

Best Arabidopsis Sequence Match ( AT3G27250.1 )
(BLAST)

001: MDQDDWLGTL RYAGKAQDKV SVDALMLRYR PIAPKPTTGQ PCGVADNNNN SSYGMSKRTK RKYVRVSKNN KGTCRGKSRS DLSDDREQTD VVTLQLLPEK
101: SDISGEYSPL DQDSLDPSVK SIIGEETQET NTWGMFNGSV TAEMETWVTV ESVTSVCEGS LSSHAVGITD VEIVDNLGKD TCPAFVSDGS NRVVWVNEAY
201: RRNVSGDDST ASVSPEVVVW LVAEEATAAM HCNYQAFTCR VRMQYTWKET KYTKTVPCDV WKMEFGGFAW RLDTTAALTL WL

Arabidopsis Description

At3g27250 [Source:UniProtKB/TrEMBL;Acc:Q9LK28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.