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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:extracellular
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34167 Canola cytosol 99.28 99.28
Bra025261.1-P Field mustard cytosol 80.87 79.72
AT3G27250.1 Thale cress cytosol 75.45 74.11
Bra025545.1-P Field mustard cytosol, plastid 56.68 56.68
PGSC0003DMT400003036 Potato cytosol 13.0 49.32
VIT_14s0171g00360.t01 Wine grape nucleus 39.71 39.29
KRH57635 Soybean plastid 42.96 38.76
KRG94328 Soybean cytosol 42.6 38.19
Solyc02g093890.1.1 Tomato cytosol 36.46 36.73
Solyc02g068030.1.1 Tomato cytosol 35.38 35.0
Bra038626.1-P Field mustard plastid 33.57 34.7
PGSC0003DMT400052105 Potato cytosol 35.02 34.4
Bra029900.1-P Field mustard cytosol 36.46 33.78
Bra038625.1-P Field mustard cytosol 35.38 33.22
Bra022512.1-P Field mustard nucleus 33.57 33.21
Bra019549.1-P Field mustard nucleus 27.44 29.46
Bra025546.1-P Field mustard cytosol, nucleus, plastid 32.13 28.71
GSMUA_Achr8P28790_001 Banana cytosol 29.96 28.62
GSMUA_AchrUn_... Banana cytosol, nucleus, peroxisome 30.69 28.33
GSMUA_Achr3P17030_001 Banana cytosol 29.6 27.7
TraesCS3D01G219400.1 Wheat mitochondrion 25.27 23.33
TraesCS3B01G247700.1 Wheat mitochondrion 23.83 22.37
TraesCS3A01G217400.1 Wheat mitochondrion 23.83 22.22
Zm00001d023799_P001 Maize mitochondrion 24.91 21.7
Zm00001d023800_P001 Maize mitochondrion 24.91 21.7
EES15909 Sorghum peroxisome 25.63 21.26
Os12t0242500-01 Rice extracellular 23.83 20.06
Bra029231.1-P Field mustard nucleus 32.49 12.59
Protein Annotations
EnsemblPlants:Bra032992.1EnsemblPlants:Bra032992.1-PEnsemblPlantsGene:Bra032992PANTHER:PTHR33595PANTHER:PTHR33595:SF4UniParc:UPI00025455EF
UniProt:M4EW09MapMan:35.2::::
Description
AT3G27250 (E=8e-131) | unknown protein
Coordinates
chrA02:-:22041667..22042500
Molecular Weight (calculated)
31201.7 Da
IEP (calculated)
6.063
GRAVY (calculated)
-0.603
Length
277 amino acids
Sequence
(BLAST)
001: MNQDEWVGTL RYAGKAQDKV SVDTLMLRYR PIAPKPTTGQ PCDAGDNNKN NSYGMNKRTK RKYVRVSKNN NTTCRGKNRS DLSDDGEQTG VVTLQLMPEK
101: SDLTSDYTPL DPMVKTITGE ETRETNTWTM FNGGGTAEVE TWVTVKSVTG VCDGSSSFHG VKCTDAEMVD KLSKDTCPAF VSDASNRVVW VNEAYRRNIS
201: GEDPSSLSLP DVTVWLVMEE PTVAMYCNYR AFTCRVRMQY TWQETKYTKT VPCDVWKMEF GGFAWRLDTT AALTLWL
Best Arabidopsis Sequence Match ( AT3G27250.1 )
(BLAST)
001: MDQDDWLGTL RYAGKAQDKV SVDALMLRYR PIAPKPTTGQ PCGVADNNNN SSYGMSKRTK RKYVRVSKNN KGTCRGKSRS DLSDDREQTD VVTLQLLPEK
101: SDISGEYSPL DQDSLDPSVK SIIGEETQET NTWGMFNGSV TAEMETWVTV ESVTSVCEGS LSSHAVGITD VEIVDNLGKD TCPAFVSDGS NRVVWVNEAY
201: RRNVSGDDST ASVSPEVVVW LVAEEATAAM HCNYQAFTCR VRMQYTWKET KYTKTVPCDV WKMEFGGFAW RLDTTAALTL WL
Arabidopsis Description
At3g27250 [Source:UniProtKB/TrEMBL;Acc:Q9LK28]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.