Factsheet for Bra022512.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G50360.1	Thale cress	nucleus	68.57	65.98
CDX91547	Canola	nucleus	88.57	51.99
Bra038625.1-P	Field mustard	cytosol	47.86	45.42
Bra029900.1-P	Field mustard	cytosol	46.79	43.81
Bra038626.1-P	Field mustard	plastid	41.43	43.28
PGSC0003DMT400039289	Potato	nucleus	43.57	39.48
KRH54218	Soybean	plastid	34.64	39.43
Solyc03g111100.1.1	Tomato	nucleus	43.57	39.35
Bra019549.1-P	Field mustard	nucleus	35.71	38.76
KRH63730	Soybean	plastid	33.21	37.5
KRH03914	Soybean	plastid	37.86	36.55
KRH57200	Soybean	plastid	36.79	35.64
PGSC0003DMT400062383	Potato	cytosol	17.86	34.97
Bra032992.1-P	Field mustard	cytosol	33.21	33.57
Bra025545.1-P	Field mustard	cytosol, plastid	32.5	32.85
Bra025261.1-P	Field mustard	cytosol	32.5	32.38
GSMUA_Achr8P28790_001	Banana	cytosol	33.21	32.07
GSMUA_Achr3P17030_001	Banana	cytosol	33.57	31.76
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	33.57	31.33
Bra025546.1-P	Field mustard	cytosol, nucleus, plastid	30.71	27.74
TraesCS3B01G247700.1	Wheat	mitochondrion	25.0	23.73
TraesCS3D01G219400.1	Wheat	mitochondrion	25.36	23.67
TraesCS3A01G217400.1	Wheat	mitochondrion	24.29	22.9
Os12t0242500-01	Rice	extracellular	25.36	21.58
Zm00001d023799_P001	Maize	mitochondrion	24.29	21.38
Zm00001d023800_P001	Maize	mitochondrion	24.29	21.38
EES15909	Sorghum	peroxisome	25.0	20.96
Bra029231.1-P	Field mustard	nucleus	43.21	16.92

Protein Annotations

EnsemblPlants:Bra022512.1	EnsemblPlants:Bra022512.1-P	EnsemblPlantsGene:Bra022512	PANTHER:PTHR33595	PANTHER:PTHR33595:SF3	SEG:seg
UniParc:UPI000254558F	UniProt:M4E164	MapMan:35.2	:	:	:

Description

AT5G50360 (E=1e-064) | unknown protein

Coordinates

chrA02:-:9330702..9331544

Molecular Weight (calculated)

30779.7 Da

IEP (calculated)

9.453

GRAVY (calculated)

-0.576

Length

280 amino acids

Sequence
(BLAST)

001: MNFRGGCCIA RYGGSGGGGD MSKVDRIMLR YRPIAPRPDS GGSSSLPLDS VSPKSRRGKR KYSKENSSSS GGSVNSNGNS KRRRNEEAKN GSETVTLPLL
101: PETPERRKEP PRVLVPAAAS SWLSFGDDGR YQAAKKSLDL TEGLLTARTE TVVSSLLTVE CVTEGEYELG CTDEEKKMNL ERDTCPGFIS DGLGRVVWTN
201: GSYRDLVIGK DKCCSKMSVW LVMKEKPLLT KRTFTCRMRL QYTCRDSLVS SITSPCDGWK MNDGGFAWRL DVNAALFLGR

Best Arabidopsis Sequence Match ( AT5G50360.1 )
(BLAST)

001: MNFRGGCCIA RYGGSGGGND MSKVDRIMLR YRPIAPRPDS GGSPASPTEK NGSVITNVSS RSRRGKRKYS KENNSSSTGS VNSNGNSKRQ RNDETKNGSG
101: GGREIVTLPL LPETPEKKDS PLKAKAAPEL GAAALWLSFN DGASYNRRYQ TELMTETVVS SLLTVECVTE RLMEGEYELG CTDEERKMNL ERDTCPGFIS
201: DGLGRVIWTN GSYRELVVGK DHEQCSKMSV WLVMKEKPLV TYRTFTCRMR LQYTCRDKEV SSITSFCDVW RMSDGGFAWR LDVDAALCLG R

Arabidopsis Description

Uncharacterized protein At5g50360 [Source:UniProtKB/TrEMBL;Acc:Q9FK36]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.