CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH09670

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63350.1	KRH09670	AT1G80650.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63730	Soybean	plastid	70.73	70.16
KRH57200	Soybean	plastid	50.81	43.25
KRH03914	Soybean	plastid	50.41	42.76
Bra038626.1-P	Field mustard	plastid	45.94	42.16
Bra038625.1-P	Field mustard	cytosol	47.15	39.32
CDY45734	Canola	nucleus	45.12	37.76
AT5G63350.1	Thale cress	nucleus	45.94	37.42
AT3G48510.1	Thale cress	cytosol	44.31	37.07
PGSC0003DMT400062383	Potato	cytosol	21.14	36.36
Bra029900.1-P	Field mustard	cytosol	43.9	36.12
CDY53329	Canola	cytosol	43.9	36.12
AT5G50360.1	Thale cress	nucleus	41.87	35.4
CDX68466	Canola	cytosol	43.09	35.33
CDY37923	Canola	nucleus	36.59	34.88
Bra019549.1-P	Field mustard	nucleus	36.59	34.88
Bra022512.1-P	Field mustard	nucleus	39.43	34.64
PGSC0003DMT400039289	Potato	nucleus	41.87	33.33
Solyc03g111100.1.1	Tomato	nucleus	41.46	32.9
GSMUA_Achr3P17030_001	Banana	cytosol	35.77	29.73
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	36.18	29.67
KRH57635	Soybean	plastid	36.18	28.99
GSMUA_Achr8P28790_001	Banana	cytosol	33.33	28.28
KRG94328	Soybean	cytosol	34.96	27.83
CDY56888	Canola	cytosol	28.46	27.24
TraesCS3B01G247700.1	Wheat	mitochondrion	32.11	26.78
TraesCS3A01G217400.1	Wheat	mitochondrion	32.11	26.6
TraesCS3D01G219400.1	Wheat	mitochondrion	30.89	25.33
CDY30747	Canola	cytosol, mitochondrion, nucleus, plastid	42.68	23.44
Os12t0242500-01	Rice	extracellular	30.49	22.8
Zm00001d023799_P001	Maize	mitochondrion	27.24	21.07
Zm00001d023800_P001	Maize	mitochondrion	27.24	21.07
CDX91547	Canola	nucleus	39.02	20.13
CDY16370	Canola	plastid	39.43	20.0
EES15909	Sorghum	peroxisome	26.02	19.16
Bra029231.1-P	Field mustard	nucleus	41.06	14.13

Protein Annotations

EMBL:ACUP02003508	EnsemblPlants:KRH54218	EnsemblPlantsGene:GLYMA_06G172200	EntrezGene:102660960	PANTHER:PTHR33595	PANTHER:PTHR33595:SF3
ProteinID:KRH54218	ProteinID:KRH54218.1	SEG:seg	UniParc:UPI00023C3A57	UniProt:A0A0R0JIC7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr6:+:14419912..14421001

Molecular Weight (calculated)

27143.7 Da

IEP (calculated)

9.841

GRAVY (calculated)

-0.458

Length

246 amino acids

Sequence
(BLAST)

001: MSKIDQIMLR FRPIAPKPLP SAAALSDAFS SENTGVSKRK DNTGSKRCSR GIRRRRNAPP PPPPPPPAVT LPLLPETPDP KKTTSELKNK NVPVWLSFEN
101: SFKNRGGTAS EKVDPCWYSP AAGSVVTVEC VMDRWQPQEE GLGLGRGDVE RKVKLEEDTC PGFISDGYGR VTWTNGAYRE IMGEGGVWLA MKVTVPCLYR
201: GFTCRVRVQY ACGKERTVPC DVWRMNSGGF AWRLDVKAAL SLSLAL

Best Arabidopsis Sequence Match ( AT5G50360.1 )
(BLAST)

001: MNFRGGCCIA RYGGSGGGND MSKVDRIMLR YRPIAPRPDS GGSPASPTEK NGSVITNVSS RSRRGKRKYS KENNSSSTGS VNSNGNSKRQ RNDETKNGSG
101: GGREIVTLPL LPETPEKKDS PLKAKAAPEL GAAALWLSFN DGASYNRRYQ TELMTETVVS SLLTVECVTE RLMEGEYELG CTDEERKMNL ERDTCPGFIS
201: DGLGRVIWTN GSYRELVVGK DHEQCSKMSV WLVMKEKPLV TYRTFTCRMR LQYTCRDKEV SSITSFCDVW RMSDGGFAWR LDVDAALCLG R

Arabidopsis Description

Uncharacterized protein At5g50360 [Source:UniProtKB/TrEMBL;Acc:Q9FK36]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.