Factsheet for Bra029900.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53329	Canola	cytosol	100.0	100.0
AT3G48510.1	Thale cress	cytosol	68.23	69.39
Bra019549.1-P	Field mustard	nucleus	57.86	67.05
Bra038625.1-P	Field mustard	cytosol	61.54	62.37
Bra038626.1-P	Field mustard	plastid	54.52	60.82
Bra022512.1-P	Field mustard	nucleus	43.81	46.79
KRH54218	Soybean	plastid	36.12	43.9
KRH57200	Soybean	plastid	42.14	43.6
KRH03914	Soybean	plastid	42.14	43.45
KRH63730	Soybean	plastid	35.12	42.34
Solyc03g111100.1.1	Tomato	nucleus	42.81	41.29
PGSC0003DMT400039289	Potato	nucleus	41.81	40.45
Bra032992.1-P	Field mustard	cytosol	33.78	36.46
Bra025261.1-P	Field mustard	cytosol	33.78	35.94
PGSC0003DMT400062383	Potato	cytosol	16.72	34.97
Bra025545.1-P	Field mustard	cytosol, plastid	31.1	33.57
GSMUA_Achr3P17030_001	Banana	cytosol	31.77	32.09
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	31.1	31.0
GSMUA_Achr8P28790_001	Banana	cytosol	29.77	30.69
TraesCS3B01G247700.1	Wheat	mitochondrion	29.1	29.49
TraesCS3D01G219400.1	Wheat	mitochondrion	29.43	29.33
TraesCS3A01G217400.1	Wheat	mitochondrion	29.1	29.29
Bra025546.1-P	Field mustard	cytosol, nucleus, plastid	28.43	27.42
Zm00001d023799_P001	Maize	mitochondrion	28.09	26.42
Zm00001d023800_P001	Maize	mitochondrion	28.09	26.42
Os12t0242500-01	Rice	extracellular	28.43	25.84
EES15909	Sorghum	peroxisome	27.76	24.85
Bra029231.1-P	Field mustard	nucleus	54.18	22.66

Protein Annotations

EnsemblPlants:Bra029900.1	EnsemblPlants:Bra029900.1-P	EnsemblPlantsGene:Bra029900	PANTHER:PTHR33595	PANTHER:PTHR33595:SF3	SEG:seg
UniParc:UPI0002543F48	UniProt:M4EM80	MapMan:35.2	:	:	:

Description

AT3G48510 (E=9e-112) | unknown protein

Coordinates

chrA01:-:14632695..14633594

Molecular Weight (calculated)

33003.1 Da

IEP (calculated)

8.833

GRAVY (calculated)

-0.640

Length

299 amino acids

Sequence
(BLAST)

001: MDSRGGCCIA RYAGGGGTYH YDLSKADRIM LRFRPIAPKP TSDGSGGKPV SSGESGGGSS DVSFKGGRRK RKCQQKENSG NARRCTPRRR SDKSVGHGGH
101: TKVTLSLLPE TPDEGDFTDL KVSVPSVEKQ HGPFWLSFSD GGGMFTPAYQ TDVMWRKVVI SSCMTVERVS DAWMDGYGLG RSDEERKMNL VRDTCPGFIS
201: DGSGRVTWTN DAYRKMARDN IPEEDGSPEN MSGDSFQVIV RLVMKDRPML TYPAFTCRVK LQFTCQDRER SSVTVPCDAW KMDNGGFAWR LDVKAALCL

Best Arabidopsis Sequence Match ( AT3G48510.1 )
(BLAST)

001: MDGRGGCCIA RYAIGSGPYD LSKADRIMLR FRPIAPKPAS PGGVNPVSSG DSGGGSSDVS FRSASRRKRK CHQLKENGGN AKRCTRRKTS DKPVVHGSAN
101: AVTLSLLPEK PIDLKAAVEK QKRQGPLWLS FKDGGGMLTP AYQTPEIVQR TVVISSCMTV ERVTDAWIDG YGLGRSDEER KMNLVRDTCP GFISDGSGRV
201: TWTNDAYRKM ARDIIPVEEG APEITSGDSF HVIVRLVMRE RPMLTSPGFT CRMKLQYTCQ NRERGSVTVP CDVWRMDVGG GFAWRLDVKA ALCL

Arabidopsis Description

At3g48510 [Source:UniProtKB/TrEMBL;Acc:Q9SMP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.