Factsheet for Bra029231.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
mitochondrion 3
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra008448.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63350.1	Bra008448.1-P	AT1G80650.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038625.1-P	Field mustard	cytosol	30.49	73.9
Bra038626.1-P	Field mustard	plastid	26.85	71.64
AT5G63350.1	Thale cress	nucleus	27.97	66.23
CDY30747	Canola	cytosol, mitochondrion, nucleus, plastid	39.16	62.5
Bra029900.1-P	Field mustard	cytosol	22.66	54.18
Bra019549.1-P	Field mustard	nucleus	19.3	53.49
Bra022512.1-P	Field mustard	nucleus	16.92	43.21
KRH63730	Soybean	plastid	14.69	42.34
KRH54218	Soybean	plastid	14.13	41.06
KRH57200	Soybean	plastid	16.08	39.79
Solyc03g111100.1.1	Tomato	nucleus	17.2	39.68
KRH03914	Soybean	plastid	16.08	39.66
PGSC0003DMT400062383	Potato	cytosol	7.83	39.16
PGSC0003DMT400039289	Potato	nucleus	16.78	38.84
Bra032992.1-P	Field mustard	cytosol	12.59	32.49
GSMUA_Achr3P17030_001	Banana	cytosol	13.01	31.42
Bra025545.1-P	Field mustard	cytosol, plastid	12.17	31.41
Bra025261.1-P	Field mustard	cytosol	12.31	31.32
GSMUA_Achr8P28790_001	Banana	cytosol	12.45	30.69
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	12.59	30.0
TraesCS3D01G219400.1	Wheat	mitochondrion	11.19	26.67
Bra025546.1-P	Field mustard	cytosol, nucleus, plastid	11.33	26.13
TraesCS3B01G247700.1	Wheat	mitochondrion	10.77	26.1
TraesCS3A01G217400.1	Wheat	mitochondrion	10.63	25.59
Zm00001d023799_P001	Maize	mitochondrion	10.63	23.9
Zm00001d023800_P001	Maize	mitochondrion	10.63	23.9
EES15909	Sorghum	peroxisome	11.05	23.65
Os12t0242500-01	Rice	extracellular	10.35	22.49

Protein Annotations

EnsemblPlants:Bra029231.1	EnsemblPlants:Bra029231.1-P	EnsemblPlantsGene:Bra029231	PANTHER:PTHR33595	PANTHER:PTHR33595:SF3	SEG:seg
UniParc:UPI0002545DB7	UniProt:M4EKB4	MapMan:35.2	:	:	:

Description

AT5G63350 (E=9e-072) | unknown protein

Coordinates

chrA02:-:26424657..26429620

Molecular Weight (calculated)

81239.0 Da

IEP (calculated)

10.138

GRAVY (calculated)

-0.409

Length

715 amino acids

Sequence
(BLAST)

001: MDVRGGCCIA RYGGYGGRYG LSKADRIMLR FRPIAPKPSS DGGGGSPGAG KYCSSTTSGG SSDVSSNTKR GKRKYHKESS GVNSRRCNKR KRPNTRTAVT
101: LSLLPDLNVS PVEKQRQNGP LWLSFSGGDH EMLTPYKTAE ISQRTVVVSS CVTVERVTDA WTNGYGLGKT DDEKKLNLAR EACPGFISDG VGRVTWTNEA
201: YRKMAKEDIN IPVEDGAPGM SYDHFHVIVR LVMKERPMLT YPAFTCRVRL QYTCQDRERG SVTVPCDVWR MDGGDSAVTK KLDTRPVGKL HQTITAVKLQ
301: TSQETYKNSG LYIHFIKPES KSRFITRTGR YTESQFPREE APNYHPLQPV GASTEKGQFA PPLPCALTPT PKYCARKLDR PKTLCLSPDI CSNTLKQNEC
401: DDYMLRSILV TSYWLQHGNV EVQDFDPIKP FNPSSNSIVL NVRMKAKLAF EIHLVLLISF VEFRTDRACF IFKSSQIGLH FLGVAYGFRA SHQKLLLVNS
501: PSASYWCFNV VFDYQLFCRT IALEIKVKFL HGVLHLVELD SPLIGFRVWP PFTILLSSFF GLTLPLLLGA LEEPPPPRLL QHARSEHRSL EIVHQLLLRL
601: SVFRHHLHVV VPRLEEDEVR VCQRRVRHAV GDVTVIRLEG ELGRWSSESR FQTRWGRRER RRERRREETR KDIGEGRHRF LSAKRRRSDG KYFVSHLNGV
701: VLVSKYLFIC RMTSF

Best Arabidopsis Sequence Match ( AT5G63350.1 )
(BLAST)

001: MDGRGGCCIA RYGGYGGRYG LSKADRIMLR FRPIAPKPAS DGGSVSLTGK SGSTTTTSGG SSDLSGKSGR GKRKYQKDCS GGNSRRCNKK KRDLSGDTAT
101: TTAVTLSLLP ETPEKRVFPD LNAFPVEKQK RNGPLWLSFN GGGEILTPYK TAEISRRTVV VSSCVTVERV TDAWIDGYGL GETNQERKMN LVEDTCPGFI
201: SDGVGRVTWT NEAYKKMARE DINIPMEEGV PEDISYDNFH VNVRLVMKER PMLTYPAFTC RVRLQYTCQD RERGSVTVPC DVWRMDGGGF AWRLDVKAAL
301: CL

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FGW7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.