Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39957 | Canola | cytosol | 14.43 | 35.9 |
| Zm00001d020472_P001 | Maize | nucleus | 18.04 | 28.69 |
| AT1G80650.1 | Thale cress | nucleus | 28.35 | 27.78 |
| AT4G00420.4 | Thale cress | nucleus | 25.26 | 25.79 |
| Bra008448.1-P | Field mustard | nucleus | 26.29 | 25.25 |
| CDY53218 | Canola | nucleus | 25.26 | 24.38 |
| Os09t0416500-01 | Rice | nucleus | 22.16 | 23.89 |
| Zm00001d020476_P001 | Maize | nucleus | 20.1 | 21.2 |
| EER96734 | Sorghum | nucleus | 18.56 | 20.93 |
| TraesCS5A01G226200.1 | Wheat | cytosol | 19.07 | 19.58 |
| TraesCS5D01G233400.1 | Wheat | cytosol | 16.49 | 18.5 |
| TraesCS5B01G224700.3 | Wheat | cytosol | 17.53 | 17.89 |
| Zm00001d005754_P001 | Maize | cytosol, peroxisome, plastid | 10.31 | 14.08 |
Protein Annotations
| EMBL:ACUP02009105 | EnsemblPlants:KRH09670 | EnsemblPlantsGene:GLYMA_15G004500 | EntrezGene:100810647 | Gene3D:3.30.160.20 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR014720 | InterPro:dsRBD_dom | PFAM:PF14709 |
| PFscan:PS50137 | ProteinID:KRH09670 | ProteinID:KRH09670.1 | ProteinID:KRH09671.1 | ProteinID:KRH09672.1 | SEG:seg |
| SMART:SM00358 | SUPFAM:SSF54768 | UniParc:UPI000233ABB3 | UniProt:I1MCB9 | MapMan:16.10.1.4.2 | : |
Description
hypothetical protein
Coordinates
chr15:+:401329..403329
Molecular Weight (calculated)
21497.8 Da
IEP (calculated)
9.625
GRAVY (calculated)
-0.609
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MENNFSHAPN FAVNLNHLPP INPFRITNSK GQMNNSCSRA AAKAVKRNPN QRMKFVASDK DIVKNPSLGM GNIVVEDTSS TSSNQKIQSC GNTTSPTQTE
101: EGMKKGTARS TLYEICAVNC WKPPIFECCK EEGPGHKRMF TFKVIIEIEA SRNIIECYGA PHGKKKAAAD HAAEGALLYL KVYKMYDEKP INKK
101: EGMKKGTARS TLYEICAVNC WKPPIFECCK EEGPGHKRMF TFKVIIEIEA SRNIIECYGA PHGKKKAAAD HAAEGALLYL KVYKMYDEKP INKK
0001: MTPQILLHNL QHCFIKMECI SLLIFDECHH AQQQSNHPYA EIMKVFYKSE SLQRPRIFGM TASPVVGKGS FQSENLSKSI NSLENLLNAK VYSVESNVQL
0101: DGFVSSPLVK VYYYRSALSD ASQSTIRYEN MLEDIKQRCL ASLKLLIDTH QTQTLLSMKR LLKRSHDNLI YTLLNLGLWG AIQAAKIQLN SDHNVQDEPV
0201: GKNPKSKICD TYLSMAAEAL SSGVAKDENA SDLLSLAALK EPLFSRKLVQ LIKILSVFRL EPHMKCIIFV NRIVTARTLS CILNNLELLR SWKSDFLVGL
0301: SSGLKSMSRR SMETILKRFQ SKELNLLVAT KVGEEGLDIQ TCCLVIRYDL PETVTSFIQS RGRARMPQSE YAFLVDSGNE KEMDLIENFK VNEDRMNLEI
0401: TYRSSEETCP RLDEELYKVH ETGACISGGS SISLLYKYCS RLPHDEFFQP KPEFQFKPVD EFGGTICRIT LPANAPISEI ESSLLPSTEA AKKDACLKAV
0501: HELHNLGVLN DFLLPDSKDE IEDELSDDEF DFDNIKGEGC SRGDLYEMRV PVLFKQKWDP STSCVNLHSY YIMFVPHPAD RIYKKFGFFM KSPLPVEAET
0601: MDIDLHLAHQ RSVSVKIFPS GVTEFDNDEI RLAELFQEIA LKVLFERGEL IPDFVPLELQ DSSRTSKSTF YLLLPLCLHD GESVISVDWV TIRNCLSSPI
0701: FKTPSVLVED IFPPSGSHLK LANGCWNIDD VKNSLVFTTY SKQFYFVADI CHGRNGFSPV KESSTKSHVE SIYKLYGVEL KHPAQPLLRV KPLCHVRNLL
0801: HNRMQTNLEP QELDEYFIEI PPELSHLKIK GLSKDIGSSL SLLPSIMHRM ENLLVAIELK HVLSASIPEI AEVSGHRVLE ALTTEKCHER LSLERLEVLG
0901: DAFLKFAVSR HLFLHHDSLD EGELTRRRSN VVNNSNLCRL AIKKNLQVYI RDQALDPTQF FAFGHPCRVT CDEVASKEVH SLNRDLGILE SNTGEIRCSK
1001: GHHWLYKKTI ADVVEALVGA FLVDSGFKGA VKFLKWIGVN VDFESLQVQD ACIASRRYLP LTTRNNLETL ENQLDYKFLH KGLLVQAFIH PSYNRHGGGC
1101: YQRLEFLGDA VLDYLMTSYF FTVFPKLKPG QLTDLRSLSV NNEALANVAV SFSLKRFLFC ESIYLHEVIE DYTNFLASSP LASGQSEGPR CPKVLGDLVE
1201: SCLGALFLDC GFNLNHVWTM MLSFLDPVKN LSNLQISPIK ELIELCQSYK WDREISATKK DGAFTVELKV TKNGCCLTVS ATGRNKREGT KKAAQLMITN
1301: LKAHENITTS HPLEDVLKNG IRNEAKLIGY NEDPIDVVDL VGLDVENLNI LETFGGNSER SSSYVIRRGL PQAPSKTEDR LPQKAIIKAG GPSSKTAKSL
1401: LHETCVANCW KPPHFECCEE EGPGHLKSFV YKVILEVEDA PNMTLECYGE ARATKKGAAE HAAQAAIWCL KHSGFLC
0101: DGFVSSPLVK VYYYRSALSD ASQSTIRYEN MLEDIKQRCL ASLKLLIDTH QTQTLLSMKR LLKRSHDNLI YTLLNLGLWG AIQAAKIQLN SDHNVQDEPV
0201: GKNPKSKICD TYLSMAAEAL SSGVAKDENA SDLLSLAALK EPLFSRKLVQ LIKILSVFRL EPHMKCIIFV NRIVTARTLS CILNNLELLR SWKSDFLVGL
0301: SSGLKSMSRR SMETILKRFQ SKELNLLVAT KVGEEGLDIQ TCCLVIRYDL PETVTSFIQS RGRARMPQSE YAFLVDSGNE KEMDLIENFK VNEDRMNLEI
0401: TYRSSEETCP RLDEELYKVH ETGACISGGS SISLLYKYCS RLPHDEFFQP KPEFQFKPVD EFGGTICRIT LPANAPISEI ESSLLPSTEA AKKDACLKAV
0501: HELHNLGVLN DFLLPDSKDE IEDELSDDEF DFDNIKGEGC SRGDLYEMRV PVLFKQKWDP STSCVNLHSY YIMFVPHPAD RIYKKFGFFM KSPLPVEAET
0601: MDIDLHLAHQ RSVSVKIFPS GVTEFDNDEI RLAELFQEIA LKVLFERGEL IPDFVPLELQ DSSRTSKSTF YLLLPLCLHD GESVISVDWV TIRNCLSSPI
0701: FKTPSVLVED IFPPSGSHLK LANGCWNIDD VKNSLVFTTY SKQFYFVADI CHGRNGFSPV KESSTKSHVE SIYKLYGVEL KHPAQPLLRV KPLCHVRNLL
0801: HNRMQTNLEP QELDEYFIEI PPELSHLKIK GLSKDIGSSL SLLPSIMHRM ENLLVAIELK HVLSASIPEI AEVSGHRVLE ALTTEKCHER LSLERLEVLG
0901: DAFLKFAVSR HLFLHHDSLD EGELTRRRSN VVNNSNLCRL AIKKNLQVYI RDQALDPTQF FAFGHPCRVT CDEVASKEVH SLNRDLGILE SNTGEIRCSK
1001: GHHWLYKKTI ADVVEALVGA FLVDSGFKGA VKFLKWIGVN VDFESLQVQD ACIASRRYLP LTTRNNLETL ENQLDYKFLH KGLLVQAFIH PSYNRHGGGC
1101: YQRLEFLGDA VLDYLMTSYF FTVFPKLKPG QLTDLRSLSV NNEALANVAV SFSLKRFLFC ESIYLHEVIE DYTNFLASSP LASGQSEGPR CPKVLGDLVE
1201: SCLGALFLDC GFNLNHVWTM MLSFLDPVKN LSNLQISPIK ELIELCQSYK WDREISATKK DGAFTVELKV TKNGCCLTVS ATGRNKREGT KKAAQLMITN
1301: LKAHENITTS HPLEDVLKNG IRNEAKLIGY NEDPIDVVDL VGLDVENLNI LETFGGNSER SSSYVIRRGL PQAPSKTEDR LPQKAIIKAG GPSSKTAKSL
1401: LHETCVANCW KPPHFECCEE EGPGHLKSFV YKVILEVEDA PNMTLECYGE ARATKKGAAE HAAQAAIWCL KHSGFLC
Arabidopsis Description
DCL4Dicer-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P84634]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.