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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG91819
KRG94751
KRH06774
KRH10294
KRH23029
KRH24840
KRH29844
KRH34962
KRH39632
KRH52586
KRH61926
KRH70104
KRH74288

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G47400.1 KRG91819 AT1G34430.1 21798944
AT2G47400.1 KRH34962 AT1G34430.1 21798944
AT2G47400.1 KRH10294 AT3G46090.1 17259181
AT2G47400.1 KRH23029 AT3G46090.1 17259181
AT2G47400.1 KRH24840 AT3G46090.1 17259181
AT2G47400.1 KRH29844 AT3G46090.1 17259181
AT3G62410.1 KRH52586 AT1G22920.1 21798944
AT3G62410.1 KRH61926 AT1G22920.1 21798944
AT3G62410.1 KRH39632 AT1G32060.1 17947231
AT3G62410.1 KRH74288 AT1G32060.1 17947231
AT3G62410.1 KRG94751 AT3G26650.1 17947231
AT3G62410.1 KRH06774 AT3G26650.1 17947231
AT3G62410.1 KRH70104 AT3G26650.1 17947231
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH69219 Soybean plastid 64.34 64.84
GSMUA_Achr11P... Banana plastid 57.36 57.36
GSMUA_Achr8P10530_001 Banana plastid 54.26 54.69
CDX76635 Canola plastid 54.26 54.26
CDY25110 Canola plastid 52.71 52.71
Bra007678.1-P Field mustard plastid 52.71 52.31
CDY11420 Canola plastid 52.71 52.31
KRH68260 Soybean plastid 53.49 52.27
CDX67892 Canola plastid 51.94 51.94
Bra003499.1-P Field mustard plastid 51.94 51.94
AT2G47400.1 Thale cress plastid 48.84 50.81
Os01t0303000-02 Rice extracellular, plasma membrane, plastid 48.84 50.81
CDX80101 Canola plastid 48.06 49.21
CDX95723 Canola plastid 48.06 49.21
CDY55379 Canola plastid 48.06 49.21
GSMUA_Achr1P13010_001 Banana plastid 48.84 48.84
TraesCS2B01G048200.1 Wheat plastid 47.29 48.41
TraesCS2A01G035100.1 Wheat plastid 47.29 48.41
CDY51422 Canola plastid 46.51 48.39
EER88061 Sorghum plastid 48.06 48.06
Bra004459.1-P Field mustard plastid 47.29 48.03
TraesCS2D01G034400.1 Wheat plastid 46.51 47.62
Solyc01g079470.2.1 Tomato plastid 45.74 47.58
Bra021396.1-P Field mustard plastid 45.74 47.58
PGSC0003DMT400018798 Potato cytosol 45.74 46.83
AT3G62410.1 Thale cress plastid 47.29 46.56
Solyc06g009630.1.1 Tomato plastid 45.74 46.46
CDY27491 Canola plastid 44.96 46.4
CDX83329 Canola plastid 44.96 46.03
Bra000451.1-P Field mustard plastid 44.96 46.03
PGSC0003DMT400023336 Potato plastid 43.41 45.16
Os03t0306800-01 Rice extracellular 44.96 44.27
EER94980 Sorghum plastid 43.41 43.08
Zm00001d044925_P001 Maize plastid 46.51 42.86
TraesCS4B01G184400.1 Wheat plastid 42.64 42.31
TraesCS4D01G185400.1 Wheat plastid 41.86 41.54
KRG96526 Soybean nucleus 52.71 41.21
Zm00001d028880_P001 Maize plastid 39.53 40.48
TraesCS4A01G120600.1 Wheat plastid 40.31 40.0
GSMUA_Achr11P... Banana plastid 39.53 39.53
HORVU4Hr1G053940.2 Barley plastid 44.96 36.48
VIT_01s0026g02480.t01 Wine grape extracellular 51.94 34.01
Protein Annotations
EMBL:ACUP02006086EnsemblPlants:KRH31794EnsemblPlantsGene:GLYMA_10G012900EntrezGene:100814289InterPro:DUF_CP12PANTHER:PTHR33921
PANTHER:PTHR33921:SF10PFAM:PF02672ProteinID:KRH31794ProteinID:KRH31794.1SEG:segSMART:SM01093
UniParc:UPI00018C70F0UniProt:A0A0R0HT35MapMan:35.1:::
Description
hypothetical protein
Coordinates
chr10:+:1168915..1170362
Molecular Weight (calculated)
13853.0 Da
IEP (calculated)
4.825
GRAVY (calculated)
-0.682
Length
129 amino acids
Sequence
(BLAST)
001: MVTIAGGVSL SSPSRVFANA KGIDSAQKAQ AVRFPALSRP IQKWPGLVKT RPVRATPEKI SEKVEESIKS AEEACSGGGG DAECAAAWDE VEELSAAASH
101: AREKQKQSDP LENYCKDNPE TDECRTYDN
Best Arabidopsis Sequence Match ( AT3G62410.1 )
(BLAST)
001: MATIATGLNI ATQRVFVTSE NRPVCLAGPV HLNNSWNLGS RTTNRMMKLQ PIKAAPEGGI SDVVEKSIKE AQETCAGDPV SGECVAAWDE VEELSAAASH
101: ARDKKKADGS DPLEEYCKDN PETNECRTYD N
Arabidopsis Description
CP12-2Calvin cycle protein CP12-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.