Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29844 | Soybean | nucleus, plastid | 77.56 | 84.03 |
| KRH10294 | Soybean | nucleus | 64.1 | 58.14 |
| KRH23029 | Soybean | nucleus | 63.46 | 57.89 |
| Bra020284.1-P | Field mustard | nucleus | 32.05 | 44.64 |
| KRH32333 | Soybean | nucleus | 45.51 | 43.29 |
| KRH67566 | Soybean | nucleus | 43.59 | 43.04 |
| Solyc11g073060.1.1 | Tomato | nucleus | 42.31 | 42.86 |
| KRH67565 | Soybean | cytosol, nucleus, plastid | 43.59 | 42.77 |
| KRG95850 | Soybean | nucleus | 42.31 | 42.58 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 47.44 | 42.29 |
| KRG95848 | Soybean | nucleus | 46.15 | 42.11 |
| KRH67564 | Soybean | nucleus | 46.15 | 41.62 |
| PGSC0003DMT400040143 | Potato | nucleus | 44.23 | 41.57 |
| KRH19739 | Soybean | cytosol, nucleus | 42.31 | 41.51 |
| PGSC0003DMT400040144 | Potato | nucleus | 43.59 | 41.21 |
| KRH70509 | Soybean | nucleus | 47.44 | 41.11 |
| PGSC0003DMT400040207 | Potato | nucleus | 42.95 | 40.85 |
| PGSC0003DMT400040141 | Potato | nucleus | 44.23 | 40.59 |
| PGSC0003DMT400040142 | Potato | nucleus | 42.31 | 40.0 |
| KRG90559 | Soybean | nucleus | 44.23 | 39.88 |
| PGSC0003DMT400040206 | Potato | nucleus | 43.59 | 39.77 |
| Solyc06g075780.1.1 | Tomato | nucleus | 39.1 | 39.61 |
| PGSC0003DMT400077934 | Potato | cytosol, nucleus, plastid | 41.03 | 39.02 |
| CDY31593 | Canola | nucleus | 39.74 | 38.75 |
| CDX71073 | Canola | nucleus | 39.1 | 38.61 |
| CDX80226 | Canola | nucleus | 39.74 | 38.51 |
| Bra006692.1-P | Field mustard | nucleus | 39.1 | 38.36 |
| Bra006691.1-P | Field mustard | nucleus | 39.1 | 38.36 |
| CDX88724 | Canola | nucleus | 39.1 | 38.36 |
| CDY09252 | Canola | nucleus | 38.46 | 38.22 |
| KRH19742 | Soybean | nucleus | 44.23 | 37.91 |
| CDY65692 | Canola | nucleus | 38.46 | 37.5 |
| Bra002528.1-P | Field mustard | nucleus | 38.46 | 37.5 |
| KRH32335 | Soybean | nucleus | 42.95 | 37.43 |
| KRH36195 | Soybean | extracellular | 44.23 | 37.3 |
| CDY30924 | Canola | nucleus | 40.38 | 37.06 |
| AT5G59820.1 | Thale cress | nucleus | 38.46 | 37.04 |
| Bra019477.1-P | Field mustard | nucleus | 39.74 | 36.47 |
| AT3G46080.1 | Thale cress | nucleus | 37.82 | 35.98 |
| AT3G46070.1 | Thale cress | nucleus | 39.1 | 35.88 |
| KRH19741 | Soybean | nucleus | 40.38 | 35.8 |
| AT3G46090.1 | Thale cress | nucleus | 38.46 | 35.71 |
| CDX68366 | Canola | nucleus | 39.74 | 35.03 |
| KRH32334 | Soybean | nucleus | 39.74 | 34.25 |
| CDY58688 | Canola | nucleus | 19.23 | 33.71 |
| CDY30925 | Canola | nucleus | 34.62 | 31.95 |
| Bra019476.1-P | Field mustard | nucleus | 34.62 | 31.95 |
| Bra018225.1-P | Field mustard | nucleus | 39.1 | 31.77 |
| CDX99130 | Canola | nucleus | 39.1 | 31.77 |
| CDX86044 | Canola | nucleus | 37.82 | 28.92 |
| KRH67769 | Soybean | nucleus | 35.26 | 25.46 |
| KRH19960 | Soybean | nucleus | 39.74 | 21.53 |
| KRH30555 | Soybean | nucleus | 41.67 | 21.1 |
| KRH32562 | Soybean | nucleus | 39.74 | 20.81 |
| KRH22825 | Soybean | nucleus | 41.67 | 20.63 |
| KRH25111 | Soybean | nucleus, plastid | 41.67 | 20.63 |
| KRH26537 | Soybean | nucleus, plastid | 41.03 | 20.45 |
| KRG92135 | Soybean | nucleus | 41.67 | 19.88 |
| KRH34655 | Soybean | nucleus | 41.67 | 18.26 |
| KRG96047 | Soybean | mitochondrion | 39.1 | 16.9 |
Protein Annotations
| EMBL:ACUP02007187 | EnsemblPlants:KRH24840 | EnsemblPlantsGene:GLYMA_12G065800 | EntrezGene:100819852 | Gene3D:3.30.160.60 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 |
| PANTHER:PTHR26374:SF198 | PFAM:PF13912 | PFscan:PS50157 | ProteinID:KRH24840 | ProteinID:KRH24840.1 | ScanProsite:PS00028 |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000233C16A | UniProt:A0A0R0HBQ4 | MapMan:15.5.15 | : |
Description
hypothetical protein
Coordinates
chr12:-:4829947..4830418
Molecular Weight (calculated)
17356.2 Da
IEP (calculated)
10.061
GRAVY (calculated)
-0.439
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRGRDKESE VGMANCLMLL TKVGETETPS RERVLSCGDF RCKTRNRKFH SFQALGGHRA SHKKLKLMAS NLSCSMAQKK HQCPICGLEF GIGQALGGHM
101: RKHRSASLNE GLITHDHAVP TSNGAERLRL CLDSNLGPYE NDLNLILRTP VLNLFI
101: RKHRSASLNE GLITHDHAVP TSNGAERLRL CLDSNLGPYE NDLNLILRTP VLNLFI
001: MVARSEEIVI VEEDTTAKCL MLLSRVGECG GGCGGDERVF RCKTCLKEFS SFQALGGHRA SHKKLINSDN PSLLGSLSNK KTKTSHPCPI CGVKFPMGQA
101: LGGHMRRHRN EKVSGSLVTR SFLPETTTVT ALKKFSSGKR VACLDLDLDS MESLVNWKLE LGRTISWS
101: LGGHMRRHRN EKVSGSLVTR SFLPETTTVT ALKKFSSGKR VACLDLDLDS MESLVNWKLE LGRTISWS
Arabidopsis Description
ZAT7ZAT7 [Source:UniProtKB/TrEMBL;Acc:A0A178VI57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.