Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- peroxisome 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53850.1 | KRH10294 | AT3G46090.1 | 17259181 |
| AT1G53850.1 | KRH23029 | AT3G46090.1 | 17259181 |
| AT1G53850.1 | KRH24840 | AT3G46090.1 | 17259181 |
| AT1G53850.1 | KRH29844 | AT3G46090.1 | 17259181 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69234 | Soybean | endoplasmic reticulum | 99.16 | 99.16 |
| KRH36037 | Soybean | endoplasmic reticulum, nucleus | 99.16 | 99.16 |
| KRG90710 | Soybean | peroxisome | 99.16 | 99.16 |
| GSMUA_Achr11P... | Banana | peroxisome | 97.05 | 97.05 |
| PGSC0003DMT400024982 | Potato | cytosol, nucleus, peroxisome | 96.62 | 96.62 |
| PGSC0003DMT400054523 | Potato | cytosol | 96.62 | 96.62 |
| Solyc02g070510.2.1 | Tomato | nucleus | 96.62 | 96.62 |
| Solyc08g016510.2.1 | Tomato | extracellular | 96.62 | 96.62 |
| AT3G14290.1 | Thale cress | cytosol | 96.2 | 96.2 |
| AT1G53850.1 | Thale cress | cytosol | 95.78 | 95.78 |
| Bra030921.1-P | Field mustard | cytosol | 95.78 | 95.78 |
| EES10115 | Sorghum | peroxisome | 95.36 | 95.36 |
| Zm00001d027688_P002 | Maize | peroxisome | 95.36 | 95.36 |
| Os11t0615700-01 | Rice | peroxisome | 95.36 | 95.36 |
| TraesCS5B01G114000.1 | Wheat | golgi, plastid, unclear | 95.36 | 95.36 |
| OQU93221 | Sorghum | cytosol | 94.94 | 94.94 |
| TraesCS4A01G167300.1 | Wheat | peroxisome | 93.67 | 93.67 |
| TraesCS4B01G151700.1 | Wheat | golgi, unclear | 93.25 | 93.25 |
| HORVU4Hr1G040770.1 | Barley | cytosol | 93.25 | 93.25 |
| TraesCS4D01G157700.1 | Wheat | peroxisome | 93.25 | 93.25 |
| CDY08208 | Canola | peroxisome | 94.51 | 91.8 |
| CDY51800 | Canola | peroxisome | 94.51 | 89.6 |
| TraesCS5D01G121300.1 | Wheat | peroxisome | 88.19 | 88.19 |
| TraesCS5A01G109000.1 | Wheat | peroxisome | 71.31 | 87.11 |
| CDY02493 | Canola | mitochondrion | 95.78 | 81.07 |
| CDY25683 | Canola | cytosol, plastid | 95.78 | 80.21 |
| VIT_09s0002g00350.t01 | Wine grape | endoplasmic reticulum | 98.31 | 79.52 |
| Zm00001d048403_P001 | Maize | extracellular | 94.51 | 76.45 |
| KRH00322 | Soybean | cytosol | 40.08 | 38.0 |
| KRH76017 | Soybean | cytosol | 40.08 | 38.0 |
| KRH65617 | Soybean | nucleus | 40.08 | 38.0 |
| KRH49455 | Soybean | endoplasmic reticulum, nucleus | 40.08 | 38.0 |
| KRH69759 | Soybean | endoplasmic reticulum, nucleus | 38.82 | 36.95 |
| KRH08047 | Soybean | cytosol, endoplasmic reticulum, nucleus | 37.97 | 36.14 |
| KRH43728 | Soybean | cytosol, endoplasmic reticulum, nucleus | 32.91 | 33.19 |
| KRH13728 | Soybean | cytosol | 32.91 | 33.19 |
| KRH65961 | Soybean | cytosol | 32.49 | 32.77 |
| KRH75739 | Soybean | cytosol, endoplasmic reticulum, nucleus | 32.49 | 32.77 |
| KRH05846 | Soybean | cytosol, nucleus | 37.55 | 31.34 |
| KRH38836 | Soybean | cytosol, nucleus | 37.13 | 30.88 |
| KRH15173 | Soybean | cytosol, nucleus | 37.13 | 30.56 |
| KRH55422 | Soybean | cytosol, endoplasmic reticulum | 30.8 | 29.67 |
| KRH26034 | Soybean | nucleus | 30.8 | 29.67 |
| KRG94269 | Soybean | cytosol | 30.8 | 29.32 |
| KRH57704 | Soybean | cytosol, endoplasmic reticulum | 30.38 | 27.59 |
| KRH57899 | Soybean | cytosol | 14.35 | 22.22 |
| KRH20407 | Soybean | cytosol | 13.5 | 20.91 |
Protein Annotations
| MapMan:19.2.6.1.1.5 | Gene3D:3.60.20.10 | EMBL:ACUP02006087 | EnsemblPlantsGene:GLYMA_10G014300 | GO:GO:0000502 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005839 | GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0019773 | GO:GO:0043161 | GO:GO:0051603 | UniProt:I1L7R0 | InterPro:IPR023332 | InterPro:IPR029055 |
| EnsemblPlants:KRH31817 | ProteinID:KRH31817 | ProteinID:KRH31817.1 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFAM:PF10584 |
| ScanProsite:PS00388 | PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF14 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_alpha_type_5 |
| InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b | SMART:SM00948 | SUPFAM:SSF56235 | UniParc:UPI00023C9240 | : |
Description
hypothetical protein
Coordinates
chr10:-:1278620..1283265
Molecular Weight (calculated)
25954.7 Da
IEP (calculated)
4.410
GRAVY (calculated)
-0.211
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGL KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DEHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGDEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNGKAIGS GSEGADSSLQ EQFSKDLTLQ EAETIALSIL
201: KQVMEEKVTP NNVDIAKVAP TYHLYTPSEV EAVISRL
101: FSYGEPMTVE STTQALCDLA LRFGEGDEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNGKAIGS GSEGADSSLQ EQFSKDLTLQ EAETIALSIL
201: KQVMEEKVTP NNVDIAKVAP TYHLYTPSEV EAVISRL
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDITLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVISRL
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDITLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVISRL
Arabidopsis Description
PAE2Proteasome subunit alpha type-5-B [Source:UniProtKB/Swiss-Prot;Acc:Q42134]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.