CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g077030.1.1	Tomato	extracellular	93.17	93.17
VIT_08s0040g00410.t01	Wine grape	cytosol	93.17	93.17
PGSC0003DMT400018521	Potato	cytosol	92.77	92.77
PGSC0003DMT400072226	Potato	cytosol	92.77	92.77
Solyc10g081130.1.1	Tomato	extracellular, plastid	91.97	91.97
GSMUA_Achr4P10040_001	Banana	cytosol	90.76	90.76
GSMUA_Achr8P23960_001	Banana	cytosol	90.36	90.36
KRH57704	Soybean	cytosol, endoplasmic reticulum	91.57	87.36
EES01630	Sorghum	cytosol	71.49	87.25
TraesCS1A01G308400.1	Wheat	cytosol	86.75	86.75
EER97635	Sorghum	cytosol	86.35	86.35
Os01t0811100-01	Rice	cytosol	86.35	86.35
Os05t0490800-01	Rice	cytosol, plasma membrane	86.35	86.35
TraesCS1B01G319100.1	Wheat	cytosol	86.35	86.35
TraesCS1D01G307800.1	Wheat	cytosol	86.35	86.35
TraesCS5A01G287400.1	Wheat	cytosol, golgi, unclear	86.35	86.35
TraesCS5B01G286900.1	Wheat	cytosol	86.35	86.35
TraesCS5D01G295300.1	Wheat	cytosol	86.35	86.35
CDY48190	Canola	cytosol	85.94	85.94
CDY04473	Canola	cytosol	85.94	85.94
Bra034316.1-P	Field mustard	cytosol	85.94	85.94
HORVU1Hr1G068490.1	Barley	cytosol	85.94	85.94
HORVU0Hr1G001180.1	Barley	cytosol	85.94	85.94
CDX71476	Canola	cytosol	85.54	85.54
CDX77059	Canola	cytosol	85.14	85.14
Zm00001d012546_P002	Maize	cytosol	86.75	84.38
Zm00001d043137_P004	Maize	cytosol	85.14	82.49
Zm00001d022316_P001	Maize	cytosol	86.75	78.55
HORVU5Hr1G076600.1	Barley	plastid	72.29	69.5
AT2G27020.2	Thale cress	cytoskeleton, cytosol, nucleus	85.94	60.97
Zm00001d007038_P001	Maize	cytosol	87.15	55.93
KRH65961	Soybean	cytosol	30.92	32.77
KRH75739	Soybean	cytosol, endoplasmic reticulum, nucleus	30.92	32.77
KRH43728	Soybean	cytosol, endoplasmic reticulum, nucleus	30.92	32.77
KRH13728	Soybean	cytosol	30.92	32.77
KRH00322	Soybean	cytosol	31.33	31.2
KRH31817	Soybean	cytosol	29.32	30.8
KRG90710	Soybean	peroxisome	29.32	30.8
KRH36037	Soybean	endoplasmic reticulum, nucleus	29.32	30.8
KRH49455	Soybean	endoplasmic reticulum, nucleus	30.92	30.8
KRH76017	Soybean	cytosol	30.92	30.8
KRH65617	Soybean	nucleus	30.92	30.8
KRH69234	Soybean	endoplasmic reticulum	28.92	30.38
KRH55422	Soybean	cytosol, endoplasmic reticulum	29.72	30.08
KRH26034	Soybean	nucleus	29.32	29.67
KRH08047	Soybean	cytosol, endoplasmic reticulum, nucleus	28.11	28.11
KRH69759	Soybean	endoplasmic reticulum, nucleus	28.11	28.11
KRH05846	Soybean	cytosol, nucleus	31.73	27.82
KRH38836	Soybean	cytosol, nucleus	31.33	27.37
KRH15173	Soybean	cytosol, nucleus	31.33	27.08
KRH57899	Soybean	cytosol	15.26	24.84
KRH20407	Soybean	cytosol	11.65	18.95

Protein Annotations

EntrezGene:100527499	MapMan:19.2.6.1.1.7	Gene3D:3.60.20.10	EMBL:ACUP02011915	EnsemblPlantsGene:GLYMA_19G072100	GO:GO:0000502
GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	UniProt:I1N783	InterPro:IPR023332	InterPro:IPR029055
EnsemblPlants:KRG94269	ProteinID:KRG94269	ProteinID:KRG94269.1	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584
ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599	PANTHER:PTHR11599:SF103	InterPro:Proteasome_alpha-type	InterPro:Proteasome_alpha3
InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI00023D84A2	SEG:seg

Description

hypothetical protein

Coordinates

chr19:+:25224667..25231239

Molecular Weight (calculated)

27336.7 Da

IEP (calculated)

5.672

GRAVY (calculated)

-0.208

Length

249 amino acids

Sequence
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQIEYAAKA VDNSGTVIGI KCKDGVVLGV EKLIPSKMML PGSNRRIHSV HRHSGMAVAG LAADGRQIVA RAKSEATNYD
101: SVYGEPIPVK ELADRVASYV HLCTLYWWLR PFGCGVILGG YDRDEPQLYM VEPSGVSYRY FGAAIGKGRQ AAKTEIEKLK LADMTCRQGL IEVAKIIYGV
201: HDEAKDKDFE LEMSWVCDES NRQHEKVPDE LLELAKAAAK AALEEMDAD

Best Arabidopsis Sequence Match ( AT2G27020.2 )
(BLAST)

001: MWLIIQNYTK EENHLKIFTI PLKDYQRMGQ IIILIKPVNN RIDPPDKTTR IVLISNPESD GAPKIWLVSG LRTKKTPFFD LSLNHSTKKK SEKSQRKKKS
101: RKMSSIGTGY DLSVTTFSPD GRVFQIEYAA KAVDNSGTVV GIKCKDGIVM GVEKLIASKM MLPGSNRRIH SVHRHAGMAV AGLAADGRQI VARAKSEARS
201: YESVYGDAVP VKELSERVAS YVHLCTLYWW LRPFGCGVIL GGYDRDGPQL YMIEPSGISY RYFGAAIGKG KQAAKTEIEK LNLSEMTCKE GVIEVAKIIY
301: KLHDEAKDKA FELEMSWICE ESKREHQKVP DDLLEEAKTA AKTALEEMDA D

Arabidopsis Description

PAG120S proteasome alpha subunit G1 [Source:TAIR;Acc:AT2G27020]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.