Factsheet for HORVU5Hr1G076600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G001180.1	Barley	cytosol	79.54	82.73
HORVU1Hr1G068490.1	Barley	cytosol	79.54	82.73
VIT_08s0040g00410.t01	Wine grape	cytosol	70.27	73.09
PGSC0003DMT400018521	Potato	cytosol	70.27	73.09
GSMUA_Achr4P10040_001	Banana	cytosol	70.27	73.09
Solyc10g077030.1.1	Tomato	extracellular	69.88	72.69
PGSC0003DMT400072226	Potato	cytosol	69.88	72.69
GSMUA_Achr8P23960_001	Banana	cytosol	69.5	72.29
KRG94269	Soybean	cytosol	69.5	72.29
Solyc10g081130.1.1	Tomato	extracellular, plastid	69.11	71.89
Bra034316.1-P	Field mustard	cytosol	66.8	69.48
CDY04473	Canola	cytosol	66.8	69.48
CDY48190	Canola	cytosol	66.8	69.48
CDX71476	Canola	cytosol	66.41	69.08
CDX77059	Canola	cytosol	66.02	68.67
KRH57704	Soybean	cytosol, endoplasmic reticulum	67.95	67.43
AT2G27020.2	Thale cress	cytoskeleton, cytosol, nucleus	68.34	50.43
HORVU3Hr1G068660.1	Barley	cytosol	25.87	28.51
HORVU6Hr1G051730.1	Barley	cytosol	12.36	25.81
HORVU5Hr1G083350.1	Barley	cytosol	23.55	24.5
HORVU4Hr1G040770.1	Barley	cytosol	21.62	23.63
HORVU7Hr1G027220.2	Barley	cytosol	23.94	23.4
HORVU2Hr1G036390.6	Barley	plastid	24.32	23.33
HORVU5Hr1G038710.1	Barley	cytosol	17.37	22.61
HORVU6Hr1G017500.1	Barley	cytosol	25.1	22.57
HORVU7Hr1G057390.2	Barley	cytosol, nucleus, plastid	23.55	21.48
HORVU4Hr1G076770.2	Barley	cytosol	22.78	20.92
HORVU3Hr1G068630.1	Barley	mitochondrion	11.2	19.08
HORVU4Hr1G042970.6	Barley	cytosol, golgi, nucleus	15.06	11.93

Protein Annotations

MapMan:19.2.6.1.1.7	Gene3D:3.60.20.10	UniProt:A0A287RV58	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824
GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005839
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	EnsemblPlantsGene:HORVU5Hr1G076600	EnsemblPlants:HORVU5Hr1G076600.1
InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF101	InterPro:Proteasome_alpha-type	InterPro:Proteasome_sua/b	SUPFAM:SSF56235	UniParc:UPI000B470915	:

Description

Proteasome endopeptidase complex [Source:UniProtKB/TrEMBL;Acc:A0A287RV58]

Coordinates

chrchr5H:+:551533712..551537788

Molecular Weight (calculated)

28585.7 Da

IEP (calculated)

8.461

GRAVY (calculated)

-0.064

Length

259 amino acids

Sequence
(BLAST)

001: MICPSPLSPR TDVSSRSSML ARPSTTAGLT YFSPLFSWPF LAVQLHLEIS MFLCRTIVGI KCKDGIVLGV EKLITSKMIL AGSNRRLHSV HRNSGLAVAG
101: LAADGRQIVS RAKSEAANYE KVYGEPMPVK ELADRVASYV HLCTLYWWLR PFGCGVILGG YDRDGPQLYM IEPSGLSYKY FGAALGKGRQ AAKTEIEKLK
201: LSELTCREGI VEVAKIIYGV HDEAKDKSFE LELSWVCEES NRQHEKVPSD LLEQAKAAA

Best Arabidopsis Sequence Match ( AT2G27020.2 )
(BLAST)

001: MWLIIQNYTK EENHLKIFTI PLKDYQRMGQ IIILIKPVNN RIDPPDKTTR IVLISNPESD GAPKIWLVSG LRTKKTPFFD LSLNHSTKKK SEKSQRKKKS
101: RKMSSIGTGY DLSVTTFSPD GRVFQIEYAA KAVDNSGTVV GIKCKDGIVM GVEKLIASKM MLPGSNRRIH SVHRHAGMAV AGLAADGRQI VARAKSEARS
201: YESVYGDAVP VKELSERVAS YVHLCTLYWW LRPFGCGVIL GGYDRDGPQL YMIEPSGISY RYFGAAIGKG KQAAKTEIEK LNLSEMTCKE GVIEVAKIIY
301: KLHDEAKDKA FELEMSWICE ESKREHQKVP DDLLEEAKTA AKTALEEMDA D

Arabidopsis Description

PAG120S proteasome alpha subunit G1 [Source:TAIR;Acc:AT2G27020]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.