Factsheet for HORVU0Hr1G001180.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G068490.1	Barley	cytosol	100.0	100.0
TraesCS1D01G307800.1	Wheat	cytosol	99.6	99.6
TraesCS1B01G319100.1	Wheat	cytosol	99.6	99.6
TraesCS1A01G308400.1	Wheat	cytosol	99.2	99.2
Os05t0490800-01	Rice	cytosol, plasma membrane	95.18	95.18
PGSC0003DMT400018521	Potato	cytosol	87.55	87.55
Solyc10g077030.1.1	Tomato	extracellular	87.15	87.15
PGSC0003DMT400072226	Potato	cytosol	87.15	87.15
GSMUA_Achr4P10040_001	Banana	cytosol	86.75	86.75
Solyc10g081130.1.1	Tomato	extracellular, plastid	86.35	86.35
VIT_08s0040g00410.t01	Wine grape	cytosol	85.94	85.94
GSMUA_Achr8P23960_001	Banana	cytosol	85.94	85.94
KRG94269	Soybean	cytosol	85.94	85.94
Bra034316.1-P	Field mustard	cytosol	82.33	82.33
CDY04473	Canola	cytosol	82.33	82.33
CDY48190	Canola	cytosol	82.33	82.33
CDX71476	Canola	cytosol	81.93	81.93
CDX77059	Canola	cytosol	81.53	81.53
HORVU5Hr1G076600.1	Barley	plastid	82.73	79.54
KRH57704	Soybean	cytosol, endoplasmic reticulum	81.12	77.39
AT2G27020.2	Thale cress	cytoskeleton, cytosol, nucleus	82.33	58.4
HORVU3Hr1G068660.1	Barley	cytosol	29.32	31.06
HORVU5Hr1G083350.1	Barley	cytosol	29.32	29.32
HORVU5Hr1G038710.1	Barley	cytosol	23.29	29.15
HORVU4Hr1G040770.1	Barley	cytosol	27.71	29.11
HORVU6Hr1G017500.1	Barley	cytosol	32.93	28.47
HORVU7Hr1G027220.2	Barley	cytosol	28.92	27.17
HORVU4Hr1G076770.2	Barley	cytosol	30.52	26.95
HORVU6Hr1G051730.1	Barley	cytosol	12.85	25.81
HORVU7Hr1G057390.2	Barley	cytosol, nucleus, plastid	29.32	25.7
HORVU2Hr1G036390.6	Barley	plastid	27.71	25.56
HORVU3Hr1G068630.1	Barley	mitochondrion	10.84	17.76
HORVU4Hr1G042970.6	Barley	cytosol, golgi, nucleus	16.47	12.54

Protein Annotations

MapMan:19.2.6.1.1.7	Gene3D:3.60.20.10	ncoils:Coil	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824
GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773
GO:GO:0051603	EnsemblPlantsGene:HORVU0Hr1G001180	EnsemblPlants:HORVU0Hr1G001180.1	InterPro:IPR023332	InterPro:IPR029055	UniProt:M0X5Y1
InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF101	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948	SUPFAM:SSF56235
UniParc:UPI0000E6ADF4	SEG:seg	:	:	:	:

Description

Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:M0X5Y1]

Coordinates

chrchrUn:+:6464811..6469430

Molecular Weight (calculated)

27181.5 Da

IEP (calculated)

6.048

GRAVY (calculated)

-0.207

Length

249 amino acids

Sequence
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQVEYAGKA VDNSGTIVGI KCKDGIVLGV EKLITSKMIL AGSNRRLHSV HRNSGLAVAG LAADGRQVVS RAKSEAANYE
101: KVYGEPMPVK ELADRVASYV HLCTLYWWLR PFGCGVILGG YDRDGPQLYM IEPSGLSYKY FGAALGKGRQ AAKTEIEKLK LSELTCREGI VEVAKIIYGI
201: HDEAKDKSFE LELSWVCDES NRQHEKVPND LLEQAKAAAQ AALEEMDAD

Best Arabidopsis Sequence Match ( AT2G27020.2 )
(BLAST)

001: MWLIIQNYTK EENHLKIFTI PLKDYQRMGQ IIILIKPVNN RIDPPDKTTR IVLISNPESD GAPKIWLVSG LRTKKTPFFD LSLNHSTKKK SEKSQRKKKS
101: RKMSSIGTGY DLSVTTFSPD GRVFQIEYAA KAVDNSGTVV GIKCKDGIVM GVEKLIASKM MLPGSNRRIH SVHRHAGMAV AGLAADGRQI VARAKSEARS
201: YESVYGDAVP VKELSERVAS YVHLCTLYWW LRPFGCGVIL GGYDRDGPQL YMIEPSGISY RYFGAAIGKG KQAAKTEIEK LNLSEMTCKE GVIEVAKIIY
301: KLHDEAKDKA FELEMSWICE ESKREHQKVP DDLLEEAKTA AKTALEEMDA D

Arabidopsis Description

PAG120S proteasome alpha subunit G1 [Source:TAIR;Acc:AT2G27020]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.